RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 NPAS1Q99742 590 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 THUMPD3Q9BV44 507 aaKnown RBP15.65■□□□□ 0.1
MRPL28-201ENST00000199706 PINK1Q9BXM7 581 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 QRSL1Q9H0R6 528 aaKnown RBP15.65■□□□□ 0.1
MRPL28-201ENST00000199706 ARMC7Q9H6L4 198 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 CACYBPQ9HB71 228 aaKnown RBP15.65■□□□□ 0.1
MRPL28-201ENST00000199706 IFT52Q9Y366 437 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 C19orf84I3L1E1 186 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 SYT5O00445 386 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 EIF1AYO14602 144 aaKnown RBP15.64■□□□□ 0.09
MRPL28-201ENST00000199706 TGM6O95932 706 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 BMP5P22003 454 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 APOBEC1P41238 236 aaKnown RBP15.64■□□□□ 0.09
MRPL28-201ENST00000199706 SESN3P58005 492 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 TRMT5Q32P41 509 aaKnown RBP15.64■□□□□ 0.09
MRPL28-201ENST00000199706 RUNDC3AQ59EK9 446 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 MRPL2Q5T653 305 aaKnown RBP15.64■□□□□ 0.09
MRPL28-201ENST00000199706 ZNF787Q6DD87 383 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 GRINAQ7Z429 371 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 OR52P1PQ8NH57 321 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 OR10D3Q8NH80 312 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 CPNE4Q96A23 557 aaPredicted RBP15.64■□□□□ 0.09
MRPL28-201ENST00000199706 MARVELD3Q96A59 401 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 CGREF1Q99674 301 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 UCK2Q9BZX2 261 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 IKZF5Q9H5V7 419 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 GP6Q9HCN6 339 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 TIGARQ9NQ88 270 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 GLRX2Q9NS18 164 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.64■□□□□ 0.09
MRPL28-201ENST00000199706 MCTS1Q9ULC4 181 aaKnown RBP15.64■□□□□ 0.09
MRPL28-201ENST00000199706 SPIN1Q9Y657 262 aaPredicted RBP15.64■□□□□ 0.09
MRPL28-201ENST00000199706 TEX15Q9BXT5 2789 aa15.64■□□□□ 0.09
MRPL28-201ENST00000199706 A0A1W2PNV4 684 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 NKX2-6A6NCS4 301 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 H0YC42 278 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 EFNA2O43921 213 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 BCAS1O75363 584 aaPredicted RBP15.63■□□□□ 0.09
MRPL28-201ENST00000199706 TNFSF13O75888 250 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 PGM3O95394 542 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 PABPC4LP0CB38 370 aaKnown RBP15.63■□□□□ 0.09
MRPL28-201ENST00000199706 CD1EP15812 388 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 CLK1P49759 484 aaKnown RBP15.63■□□□□ 0.09
MRPL28-201ENST00000199706 TPD52P55327 224 aaPredicted RBP15.63■□□□□ 0.09
MRPL28-201ENST00000199706 RBBP4Q09028 425 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 KLF10Q13118 480 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 PON3Q15166 354 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 HIST2H2BCQ6DN03 193 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 REEP3Q6NUK4 255 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 P4HA3Q7Z4N8 544 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 DMRTC2Q8IXT2 367 aaPredicted RBP15.63■□□□□ 0.09
MRPL28-201ENST00000199706 FNDC9Q8TBE3 224 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 SMPDL3BQ92485 455 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 CNOT9Q92600 299 aaKnown RBP15.63■□□□□ 0.09
MRPL28-201ENST00000199706 RNASE6Q93091 150 aaKnown RBP15.63■□□□□ 0.09
MRPL28-201ENST00000199706 ZNF524Q96C55 264 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 CCDC106Q9BWC9 280 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 SPATA9Q9BWV2 254 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 SERINC1Q9NRX5 453 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 PACSIN3Q9UKS6 424 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 ZNF232Q9UNY5 417 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 ZNF443Q9Y2A4 671 aaPredicted RBP15.63■□□□□ 0.09
MRPL28-201ENST00000199706 CACNA1DQ01668 2161 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 TACC2O95359 2948 aa15.63■□□□□ 0.09
MRPL28-201ENST00000199706 A0A0J9YW62 118 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 CFAP73A6NFT4 308 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 CLDN24A6NM45 220 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 C5orf58C9J3I9 102 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 CYP7B1O75881 506 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 NUDT7P0C024 238 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 IL11P20809 199 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 PRKAR1BP31321 381 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 EIF1AXP47813 144 aaKnown RBP15.62■□□□□ 0.09
MRPL28-201ENST00000199706 RNF144AP50876 292 aaPredicted RBP15.62■□□□□ 0.09
MRPL28-201ENST00000199706 CDK6Q00534 326 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 SORDQ00796 357 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 EPS8Q12929 822 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 SGCBQ16585 318 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 HBMQ6B0K9 141 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 ZNF836Q6ZNA1 936 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 PLEKHM3Q6ZWE6 761 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 ZNF550Q7Z398 422 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 NET1Q7Z628 596 aaPredicted RBP15.62■□□□□ 0.09
MRPL28-201ENST00000199706 SERPINA11Q86U17 422 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 KRT73Q86Y46 540 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 SLC30A8Q8IWU4 369 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 BHLHE22Q8NFJ8 381 aaPredicted RBP15.62■□□□□ 0.09
MRPL28-201ENST00000199706 FIG4Q92562 907 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 C14orf79Q96F83 325 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 GMPPAQ96IJ6 420 aaPredicted RBP15.62■□□□□ 0.09
MRPL28-201ENST00000199706 ZNF845Q96IR2 970 aaPredicted RBP15.62■□□□□ 0.09
MRPL28-201ENST00000199706 SH3GL1Q99961 368 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 SPATA5L1Q9BVQ7 753 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 COQ10BQ9H8M1 238 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 EVA1AQ9H8M9 152 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 CAPN7Q9Y6W3 813 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 LRBAP50851 2863 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 FBN2P35556 2912 aa15.62■□□□□ 0.09
MRPL28-201ENST00000199706 FBP2O00757 339 aa15.61■□□□□ 0.09
MRPL28-201ENST00000199706 TNFSF11O14788 317 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms