RNA–Protein interactions for RNA: ENST00000003302.8

USP28-201, Transcript of ubiquitin specific peptidase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP28, Length 4,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-201ENST00000003302 OR1E3Q8WZA6 343 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 SLC38A2Q96QD8 506 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 BABAM2Q9NXR7 383 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 ZSCAN5BA6NJL1 495 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 ACOD1A6NK06 481 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 ADH1CP00326 375 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 POLR2CP19387 275 aaPredicted RBP9.88□□□□□ -0.83
USP28-201ENST00000003302 NDUFS1P28331 727 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 FOXL2P58012 376 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 ODF4Q2M2E3 257 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 SFRP4Q6FHJ7 346 aaPredicted RBP9.88□□□□□ -0.83
USP28-201ENST00000003302 DNAAF1Q8NEP3 725 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 YIPF5Q969M3 257 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 KCTD12Q96CX2 325 aaKnown RBP9.88□□□□□ -0.83
USP28-201ENST00000003302 FOXN4Q96NZ1 517 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 UNC13CQ8NB66 2214 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 UBE2MP61081 183 aaKnown RBP9.88□□□□□ -0.83
USP28-201ENST00000003302 ANKRD54Q6NXT1 300 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 Q6ZTK2 550 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 ZNF765Q7L2R6 523 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 TCTE3Q8IZS6 198 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 FAM174AQ8TBP5 190 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 IFT27Q9BW83 186 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 TSPAN10Q9H1Z9 355 aaPredicted RBP9.88□□□□□ -0.83
USP28-201ENST00000003302 GHITMQ9H3K2 345 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 CYSLTR2Q9NS75 346 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 KLK11Q9UBX7 282 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 SIGLEC7Q9Y286 467 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 GSTK1Q9Y2Q3 226 aa9.88□□□□□ -0.83
USP28-201ENST00000003302 PRR19A6NJB7 356 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 LEUTXA8MZ59 168 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 HLA-DPB1P04440 258 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 DRD2P14416 443 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 OC90Q02509 493 aaPredicted RBP9.87□□□□□ -0.83
USP28-201ENST00000003302 CRYZQ08257 329 aaKnown RBP9.87□□□□□ -0.83
USP28-201ENST00000003302 KRR1Q13601 381 aaKnown RBP9.87□□□□□ -0.83
USP28-201ENST00000003302 ARHGAP19Q14CB8 494 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 SIX5Q8N196 739 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 ACBD7Q8N6N7 88 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 ABHD4Q8TB40 342 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 ERVMER34-1Q9H9K5 563 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 TMEM5Q9Y2B1 443 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 CXorf51AA0A1B0GTR3 108 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 DAPL1A0PJW8 107 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 PIN1P1O15428 100 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 C1QBP02746 253 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 POU3F2P20265 443 aaPredicted RBP9.87□□□□□ -0.83
USP28-201ENST00000003302 MPIP34949 423 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 OR3A3P47888 321 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 HEPHL1Q6MZM0 1159 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 RNF166Q96A37 237 aaPredicted RBP9.87□□□□□ -0.83
USP28-201ENST00000003302 ACTRT3Q9BYD9 372 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 SELENOFO60613 162 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 FZD7O75084 574 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 PGDP52209 483 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 NANOS3P60323 173 aaKnown RBP9.87□□□□□ -0.83
USP28-201ENST00000003302 SHC2P98077 582 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 MELKQ14680 651 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 KIF26BQ2KJY2 2108 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 GATSQ8NAP1 163 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 RASSF5Q8WWW0 418 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 IGFLR1Q9H665 355 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 ZNF222Q9UK12 451 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 MGAT4AQ9UM21 535 aa9.87□□□□□ -0.83
USP28-201ENST00000003302 EXOSC1Q9Y3B2 195 aaKnown RBP9.87□□□□□ -0.83
USP28-201ENST00000003302 MCIDASD6RGH6 385 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 H0YC42 278 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 LINC01565O15544 149 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 RGS11O94810 467 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 HIST1H1CP16403 213 aaKnown RBP9.86□□□□□ -0.83
USP28-201ENST00000003302 HLA-DMAP28067 261 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 TNK1Q13470 666 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 NTRK2Q16620 822 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 DUSP6Q16828 381 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 TMEM64Q6YI46 380 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 OAFQ86UD1 273 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 OR5M3Q8NGP4 307 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 TMEM239Q8WW34 195 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 BPIFA2Q96DR5 249 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 OR2A5Q96R48 311 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 POT1Q9NUX5 634 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 ABCA7Q8IZY2 2146 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 DCTN6O00399 190 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 SC5DO75845 299 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 PRR5P85299 388 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 ACSM3Q53FZ2 586 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 OR8H1Q8NGG4 311 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 OR2L8Q8NGY9 312 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 PELI1Q96FA3 418 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 PPP1R16AQ96I34 528 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 FAM60AQ9NP50 221 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 PILRAQ9UKJ1 303 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 ITGB1BP2Q9UKP3 347 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 DOK2O60496 412 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 SBK2P0C263 348 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 RPA4Q13156 261 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 FGFBP1Q14512 234 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 NDUFA5Q16718 116 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 HES5Q5TA89 166 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 PARM1Q6UWI2 310 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms