RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Gm11214V9GX06 183 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Ranbp2Q9ERU9 3053 aaKnown RBP21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Chil5A0A0G2JDS2 431 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Btbd35f28A2CFD5 498 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Usp36B1AQJ2 1098 aaKnown RBP21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 A530032D15RikE9Q422 215 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Btbd35f30J3QML3 498 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Mapk12O08911 367 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Ulk1O70405 1051 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Nfkbil1O88995 381 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Nudt19P11930 357 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 AboP38649 332 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 MatkP41242 505 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Rgs14P97492 547 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Teddm2Q208S0 260 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Pomt2Q8BGQ4 820 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Peli2Q8BST6 419 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Olfr1312Q8VF10 317 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Olfr643Q8VGY1 314 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Twist2Q9D030 160 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 PgdQ9DCD0 483 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Prl3c1Q9QUN5 212 aa21.17■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Zfp442A2AQA0 667 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Cx3cl1O35188 395 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Arl6O88848 186 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Zfp37P17141 594 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Man2a1P27046 1150 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 LumP51885 338 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Map3k8Q07174 467 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 VwceQ3U515 929 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Il18r1Q61098 537 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 NnatQ61979 81 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Pan3Q640Q5 837 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 ParpbpQ6IRT3 573 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 DmknQ6P253 517 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Gm5346Q7M766 736 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Lcmt2Q8BYR1 686 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Dpep2Q8C255 478 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Gulp1Q8K2A1 304 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Vmn1r189Q8K3N3 312 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Lrrc49Q91YK0 686 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 AmnQ99JB7 458 aaKnown RBP21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 P2ry12Q9CPV9 347 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Cacna1gQ5SUF7 2381 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 MpdzQ8VBX6 2055 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Vmn2r98E9PZ56 857 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Slc16a5G5E8K6 468 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 AlyrefO08583 255 aaKnown RBP21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 CmahQ61419 577 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 TiprlQ8BH58 271 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Galnt18Q8K1B9 622 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Ttc4Q8R3H9 386 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Olfr781Q8VFZ8 311 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Olfr799Q8VGI7 311 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Olfr807Q8VGI9 311 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 St3gal4Q91Y74 333 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Ndufb2Q9CPU2 105 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Kti12Q9D1R2 351 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 GrifinQ9D1U0 144 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Zdhhc21Q9D270 265 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Slc35a4Q9D321 324 aa21.16■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Tbc1d25A1A5B6 742 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 PigfO09101 219 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 IlkO55222 452 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Cops4O88544 406 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Prkg2Q61410 762 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 AardQ811W1 167 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Mfsd11Q8BJ51 449 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Ctdsp2Q8BX07 270 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Q8C784 167 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Tmem203Q8R235 136 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Rnf167Q91XF4 347 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Taar1Q923Y8 332 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Zfp810Q99K45 461 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Mospd2Q9CWP6 518 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Cypt12Q9DAR6 119 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Raet1dQ9JI58 249 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Prss16Q9QXE5 509 aa21.15■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Vmn2r76E9Q3F5 853 aa21.14■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Arhgap40E9Q6X9 672 aa21.14■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Mpzl2O70255 215 aa21.14■□□□□ 0.98
Upf3a-201ENSMUST00000043767 P01735 133 aa21.14■□□□□ 0.98
Upf3a-201ENSMUST00000043767 ItgamP05555 1153 aa21.14■□□□□ 0.98
Upf3a-201ENSMUST00000043767 RoraP51448 523 aa21.14■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Mup20Q5FW60 181 aa21.14■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Timd4Q6U7R4 343 aa21.14■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Thap1Q8CHW1 210 aa21.14■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Vmn1r6Q8R2D4 303 aa21.14■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Imp3Q921Y2 184 aaKnown RBP21.14■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Hrasls5Q9CPX5 270 aa21.14■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Bex4Q9CWT2 118 aa21.14■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Lrrc51Q9DAK8 192 aa21.14■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Olfr44Q9EQB8 314 aa21.14■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Fads2Q9Z0R9 444 aaKnown RBP21.14■□□□□ 0.98
Upf3a-201ENSMUST00000043767 Tns1E9Q0S6 1888 aaKnown RBP21.14■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Znf382B2RXC5 579 aa21.14■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Gm3149E9PW52 257 aa21.14■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Gm21103E9Q2Q1 267 aa21.14■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Gm3476K7N6V0 257 aa21.14■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Gm8362K7N6Y6 257 aa21.14■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms