RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 AgrpP56473 131 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Nrsn2Q5HZK2 202 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ugt2a3Q8BWQ1 534 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Vmn1r200Q8R281 312 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 PlgrktQ9D3P8 147 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Srpk3Q9Z0G2 565 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Cyp2d37-psF6YKB5 150 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gfra2O08842 464 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Man2b2O54782 1018 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Klk1b9P15949 261 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Dbx1P52950 335 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Arhgef39Q66JY6 344 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Rtp2Q80ZI2 223 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Tmem268Q8R239 342 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr437Q8VEV1 310 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Atg12Q9CQY1 141 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Pfn3Q9DAD6 137 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Chst11Q9JME2 352 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Kcne5Q9QZ26 143 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Col11a1Q61245 1804 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Pgm2A2CEK3 580 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm8765B7ZWJ3 1017 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm16434J3QN10 205 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 4930555G01RikL7N253 205 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 JtbO88824 146 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Clec10aP49300 304 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm906Q3V0M1 1017 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Spaca9Q7TPM5 168 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr776Q7TRI3 312 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr298Q7TS06 332 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Zdhhc13Q9CWU2 622 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Efcab11Q9D0E5 162 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Bbs10Q9DBI2 713 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr948Q9EQ95 321 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr971Q9EQ96 307 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Loxl3Q9Z175 754 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm17949A0A1B0GRV7 212 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm13539A0A1B0GSM6 183 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Mptx2D3YYJ7 219 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm8127E9Q0P0 100 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 4930579F01RikE9Q3L6 325 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm20518E9Q548 580 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm8094K7N6U8 211 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Dbil5O09035 87 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Klrg1O88713 188 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Cd8aP01731 247 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gon7P0C8B4 98 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Cd28P31041 218 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ebf1Q07802 591 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Snx33Q4VAA7 574 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Q5SPV6 233 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 NarflQ7TMW6 476 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Rims3Q80U57 307 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gpr171Q8BG55 319 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Lrrtm2Q8BGA3 515 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 PigwQ8C398 503 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Fbxo45Q8K3B1 286 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Phospho1Q8R2H9 267 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Man2c1Q91W89 1039 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Chrm5Q920H4 532 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 MtapQ9CQ65 283 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Pebp4Q9D9G2 242 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Spaca1Q9DA48 305 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Col4a3Q9QZS0 1669 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr1493-ps1A0A140LHU2 316 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 A0A286YCH8 300 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 3110040M04RikA0A286YDK0 300 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 A0A286YE43 300 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 FshrP35378 692 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Rps5P97461 204 aaKnown RBP11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr3Q60879 313 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr714Q7TRN0 317 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr771Q8VFH6 317 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Usb1Q91W78 267 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Slc22a7Q91WU2 540 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Sucnr1Q99MT6 317 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Obp1aQ9D3H2 163 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Zfp68Q9Z116 606 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Fam83cA2ARK0 776 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr619E9PV95 320 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Sult3a2G5E904 293 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Igkv7-33P01632 114 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 B3gat2P59270 324 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Mex3dQ3UE17 643 aaKnown RBP11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Tas2r143Q7TQB9 293 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Sgpp2Q810K3 354 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Coro2bQ8BH44 480 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 IlvblQ8BU33 632 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm13199Q8C8E0 125 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr1387Q8VFA9 311 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Mrgpra8Q91ZC4 305 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Psat1Q99K85 370 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Sesn3Q9CYP7 492 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Cmss1Q9CZT6 276 aaKnown RBP11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Slc6a19Q9D687 634 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Plscr2Q9DCW2 307 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Il21Q9ES17 146 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Dmrta2A2A9A2 531 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Capza1P47753 286 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Agbl5Q09M02 886 aa11.09□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms