RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 KCNJ5P48544 419 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 RBPJQ06330 500 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 BNIP1Q12981 228 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 CEACAM7Q14002 265 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 TMEM44Q2T9K0 475 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 GLYR1Q49A26 553 aaPredicted RBP11.94□□□□□ -0.5
GTF3A-209ENST00000640289 NHSL2Q5HYW2 709 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 VASNQ6EMK4 673 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 CD163Q86VB7 1156 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 OR5M9Q8NGP3 310 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 ZNF563Q8TA94 476 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 PRR7Q8TB68 274 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 FAM57AQ8TBR7 257 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 SLC26A7Q8TE54 656 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 ABTB1Q969K4 478 aaPredicted RBP11.94□□□□□ -0.5
GTF3A-209ENST00000640289 ZBTB8AQ96BR9 441 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 SARAFQ96BY9 339 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 SLC7A6OSQ96CW6 309 aaPredicted RBP11.94□□□□□ -0.5
GTF3A-209ENST00000640289 RNF145Q96MT1 663 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 TIMP4Q99727 224 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 PIGQQ9BRB3 760 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 PINK1Q9BXM7 581 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 ARMC7Q9H6L4 198 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 PNPLA3Q9NST1 481 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 CD300AQ9UGN4 299 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 ACAD8Q9UKU7 415 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 ZNF835Q9Y2P0 537 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 ZNF337Q9Y3M9 751 aa11.94□□□□□ -0.5
GTF3A-209ENST00000640289 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 OR14I1A6ND48 311 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 TMEM229AB2RXF0 380 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 H3BML4 177 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 EFNA2O43921 213 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 HSD17B1P14061 328 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 GGT1P19440 569 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 CHMP24386 653 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 PSMA4P25789 261 aaKnown RBP11.93□□□□□ -0.5
GTF3A-209ENST00000640289 HTR1EP28566 365 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 GCKP35557 465 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 IDH2P48735 452 aaKnown RBP11.93□□□□□ -0.5
GTF3A-209ENST00000640289 LHX2P50458 406 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 SESN3P58005 492 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 GXYLT1Q4G148 440 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 EMC4Q5J8M3 183 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 SAMD4BQ5PRF9 694 aaKnown RBP11.93□□□□□ -0.5
GTF3A-209ENST00000640289 C1QL3Q5VWW1 255 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 AAGABQ6PD74 315 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 C3P1Q6ZMU1 363 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 Q6ZPB1 254 aaPredicted RBP11.93□□□□□ -0.5
GTF3A-209ENST00000640289 LACC1Q8IV20 430 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 ZNF440Q8IYI8 595 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 GTPBP8Q8N3Z3 284 aaPredicted RBP11.93□□□□□ -0.5
GTF3A-209ENST00000640289 OR10Q1Q8NGQ4 319 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 RELTQ969Z4 430 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 PRR14Q9BWN1 585 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 C1orf21Q9H246 121 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 TINAGQ9UJW2 476 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 KALRNO60229 2985 aa11.93□□□□□ -0.5
GTF3A-209ENST00000640289 TRGV8A0A0C4DH27 118 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 C7orf72A4D263 438 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 H0YC42 278 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 J3QKU1 62 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 M0R3H8 397 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 ETV2O00321 342 aaPredicted RBP11.92□□□□□ -0.5
GTF3A-209ENST00000640289 BCKDKO14874 412 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 PDE5AO76074 875 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 NTN1O95631 604 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 LGI1O95970 557 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 ACTL6AO96019 429 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 OPN1LWP04000 364 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 FESP07332 822 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 PEPDP12955 493 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 ZNF17P17021 662 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 TNFRSF1BP20333 461 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 SLC6A8P48029 635 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 ZNF136P52737 540 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 TPD52P55327 224 aaPredicted RBP11.92□□□□□ -0.5
GTF3A-209ENST00000640289 SRYQ05066 204 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 ZSWIM7Q19AV6 140 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 CYBRD1Q53TN4 286 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 SLC25A53Q5H9E4 307 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 WLSQ5T9L3 541 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 GLYATQ6IB77 296 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 ZNF585AQ6P3V2 769 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 POMZP3Q6PJE2 187 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 ZNF550Q7Z398 422 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 DOLPP1Q86YN1 238 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 UBQLNLQ8IYU4 475 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 CADM2Q8N3J6 435 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 BHLHE22Q8NFJ8 381 aaPredicted RBP11.92□□□□□ -0.5
GTF3A-209ENST00000640289 OR4D11Q8NGI4 311 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 VANGL1Q8TAA9 524 aaPredicted RBP11.92□□□□□ -0.5
GTF3A-209ENST00000640289 ST8SIA1Q92185 356 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 SMPDL3BQ92485 455 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 WDYHV1Q96HA8 205 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 CLPTM1LQ96KA5 538 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 ARHGDIGQ99819 225 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 PCDHAC1Q9H158 963 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 TMEM185BQ9H7F4 350 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 ACER3Q9NUN7 267 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms