RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 CLDN2P57739 230 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 NXPH1P58417 271 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ERVK11-1P61568 191 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ESRRGP62508 458 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 RAE1P78406 368 aaKnown RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 BLOC1S1P78537 153 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 GAGE1Q13065 139 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 NFATC2Q13469 925 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 CCNIQ14094 377 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 IRF4Q15306 451 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 OR4D1Q15615 310 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 INPP5JQ15735 1006 aaPredicted RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 SLC1A5Q15758 541 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 DEFB115Q30KQ5 88 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 GLYR1Q49A26 553 aaPredicted RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 LINC01620Q4KN68 170 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 WASHC2DQ5SRD0 308 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 UTF1Q5T230 341 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 CERCAMQ5T4B2 595 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 SUSD4Q5VX71 490 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 SYPL2Q5VXT5 272 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 SLX4IPQ5VYV7 408 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 HIST2H2BCQ6DN03 193 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 HIST2H2BDQ6DRA6 164 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ZNF770Q6IQ21 691 aaPredicted RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 PRR27Q6MZM9 219 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 CAPN13Q6MZZ7 669 aaPredicted RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 UGT3A1Q6NUS8 523 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 RPL13AP3Q6NVV1 102 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ZNF544Q6NX49 715 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 FAM71F2Q6NXP2 309 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 FAM199XQ6PEV8 388 aaPredicted RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 SYCE2Q6PIF2 218 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 BTNL3Q6UXE8 466 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 TMPRSS11AQ6ZMR5 421 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 GDPD3Q7L5L3 318 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 TIPARPQ7Z3E1 657 aaKnown RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 MRGPREQ86SM8 312 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 DHDDSQ86SQ9 333 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 SATL1Q86VE3 508 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 LACC1Q8IV20 430 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 NRMQ8IXM6 262 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 FGFRL1Q8N441 504 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 KIF2BQ8N4N8 673 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 SLC5A8Q8N695 610 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 CNBD1Q8NA66 436 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 SLC38A9Q8NBW4 561 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 PXT1Q8NFP0 134 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 OR51D1Q8NGF3 324 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 OR1L6Q8NGR2 347 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 OR11L1Q8NGX0 322 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 OR52E5Q8NH55 327 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 SLC35B2Q8TB61 432 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 PIGXQ8TBF5 258 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 LGALS14Q8TCE9 139 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 SAP25Q8TEE9 199 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 WFIKKN2Q8TEU8 576 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 PPP4R1Q8TF05 950 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 APH1BQ8WW43 257 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 FCAMRQ8WWV6 532 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 FAM3CQ92520 227 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 IGSF8Q969P0 613 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 TMBIM1Q969X1 311 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 TAMM41Q96BW9 452 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 MOB3AQ96BX8 217 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 C8orf44Q96CB5 159 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 SH3YL1Q96HL8 342 aaPredicted RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 ZNF570Q96NI8 536 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ZFP3Q96NJ6 502 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 PPP1R2P1Q96PQ5 205 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 QKIQ96PU8 341 aaKnown RBP eCLIP2.74□□□□□ -1.97
VIM-210ENST00000637053 COPS8Q99627 209 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 MAP3K3Q99759 626 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 PCGF1Q9BSM1 259 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 IFT27Q9BW83 186 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 BEX2Q9BXY8 128 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 YTHDF1Q9BYJ9 559 aaKnown RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 ILKAPQ9H0C8 392 aaPredicted RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 OR10A5Q9H207 317 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 PLEKHA1Q9HB21 404 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 DNAJC4Q9NNZ3 241 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ZC4H2Q9NQZ6 224 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ACOXLQ9NUZ1 547 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 GIN1Q9NXP7 522 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ARL15Q9NXU5 204 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 VNN3Q9NY84 501 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 TMEM9Q9P0T7 183 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 SAE1Q9UBE0 346 aaPredicted RBP2.74□□□□□ -1.97
VIM-210ENST00000637053 NLKQ9UBE8 527 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 CLN8Q9UBY8 286 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 NDRG3Q9UGV2 375 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 PSORS1C1Q9UIG5 152 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 KIF25Q9UIL4 384 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 BTNL2Q9UIR0 455 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 KLHL21Q9UJP4 597 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 SLC25A13Q9UJS0 675 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 FZD4Q9ULV1 537 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ICAM5Q9UMF0 924 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 MAP3K2Q9Y2U5 619 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 MEMO1Q9Y316 297 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms