RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 KHKP50053 298 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 NR1H2P55055 460 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 QPRTQ15274 297 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 ACKR1Q16570 336 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 C3orf33Q6P1S2 294 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 EIF3MQ7L2H7 374 aaKnown RBP16.01■□□□□ 0.15
PNKP-225ENST00000636214 ANKRD46Q86W74 232 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 LRRC34Q8IZ02 419 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 SLC43A2Q8N370 569 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 WFDC11Q8NEX6 87 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 RNF128Q8TEB7 428 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 ABHD3Q8WU67 409 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 PIP5K1AQ99755 562 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 KLHDC3Q9BQ90 382 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 TACO1Q9BSH4 297 aaKnown RBP16.01■□□□□ 0.15
PNKP-225ENST00000636214 ACTR6Q9GZN1 396 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 OR51I1Q9H343 314 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 ZNF395Q9H8N7 513 aaPredicted RBP16.01■□□□□ 0.15
PNKP-225ENST00000636214 SERINC1Q9NRX5 453 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 GPR52Q9Y2T5 361 aa16.01■□□□□ 0.15
PNKP-225ENST00000636214 SIAH2O43255 324 aa16■□□□□ 0.15
PNKP-225ENST00000636214 PRKD3O94806 890 aa16■□□□□ 0.15
PNKP-225ENST00000636214 PGCP20142 388 aa16■□□□□ 0.15
PNKP-225ENST00000636214 SHC1P29353 583 aa16■□□□□ 0.15
PNKP-225ENST00000636214 ANXA11P50995 505 aaKnown RBP16■□□□□ 0.15
PNKP-225ENST00000636214 TOMM34Q15785 309 aaPredicted RBP16■□□□□ 0.15
PNKP-225ENST00000636214 ARHGAP11BQ3KRB8 267 aa16■□□□□ 0.15
PNKP-225ENST00000636214 STAC2Q6ZMT1 411 aa16■□□□□ 0.15
PNKP-225ENST00000636214 WFDC8Q8IUA0 241 aa16■□□□□ 0.15
PNKP-225ENST00000636214 CLEC4FQ8N1N0 589 aa16■□□□□ 0.15
PNKP-225ENST00000636214 ANKRD42Q8N9B4 389 aa16■□□□□ 0.15
PNKP-225ENST00000636214 STEAP2Q8NFT2 490 aa16■□□□□ 0.15
PNKP-225ENST00000636214 XAGE5Q8WWM1 108 aa16■□□□□ 0.15
PNKP-225ENST00000636214 TMEM234Q8WY98 164 aa16■□□□□ 0.15
PNKP-225ENST00000636214 ST8SIA1Q92185 356 aa16■□□□□ 0.15
PNKP-225ENST00000636214 TESCQ96BS2 214 aa16■□□□□ 0.15
PNKP-225ENST00000636214 SORT1Q99523 831 aa16■□□□□ 0.15
PNKP-225ENST00000636214 SRXN1Q9BYN0 137 aa16■□□□□ 0.15
PNKP-225ENST00000636214 LAT2Q9GZY6 243 aa16■□□□□ 0.15
PNKP-225ENST00000636214 KLHL9Q9P2J3 617 aa16■□□□□ 0.15
PNKP-225ENST00000636214 KLHL13Q9P2N7 655 aa16■□□□□ 0.15
PNKP-225ENST00000636214 MKLN1Q9UL63 735 aa16■□□□□ 0.15
PNKP-225ENST00000636214 WDR45Q9Y484 360 aa16■□□□□ 0.15
PNKP-225ENST00000636214 NF1P21359 2839 aa16■□□□□ 0.15
PNKP-225ENST00000636214 E9PBE3 544 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 UBTFL6P0CB48 400 aaPredicted RBP15.99■□□□□ 0.15
PNKP-225ENST00000636214 DHRS4L1P0CG22 281 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 OR12D1P0DN82 309 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 IL32P24001 234 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 ADSLP30566 484 aaPredicted RBP15.99■□□□□ 0.15
PNKP-225ENST00000636214 S100A3P33764 101 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 ZNF141Q15928 474 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 ALKBH2Q6NS38 261 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 TNFAIP8L2Q6P589 184 aaPredicted RBP15.99■□□□□ 0.15
PNKP-225ENST00000636214 TUSC5Q8IXB3 177 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 LRRC75A-AS1Q8N1F1 130 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 TRIML2Q8N7C3 387 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 ARSGQ96EG1 525 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 OR5B2Q96R09 309 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 ZBTB18Q99592 522 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 THUMPD3Q9BV44 507 aaKnown RBP15.99■□□□□ 0.15
PNKP-225ENST00000636214 HDHD5Q9BXW7 423 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 ZNF350Q9GZX5 532 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 OR10A4Q9H209 315 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 MEAF6Q9HAF1 191 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 GP6Q9HCN6 339 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 POLE3Q9NRF9 147 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 MARCOQ9UEW3 520 aaPredicted RBP15.99■□□□□ 0.15
PNKP-225ENST00000636214 SLC35A3Q9Y2D2 325 aa15.99■□□□□ 0.15
PNKP-225ENST00000636214 SPIN1Q9Y657 262 aaPredicted RBP15.99■□□□□ 0.15
PNKP-225ENST00000636214 ZNF469Q96JG9 3925 aaPredicted RBP15.99■□□□□ 0.15
PNKP-225ENST00000636214 NIPBLQ6KC79 2804 aaeCLIP15.98■□□□□ 0.15
PNKP-225ENST00000636214 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.98■□□□□ 0.15
PNKP-225ENST00000636214 YES1P07947 543 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 PSMB1P20618 241 aaKnown RBP15.98■□□□□ 0.15
PNKP-225ENST00000636214 HOXC12P31275 282 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 CASP9P55211 416 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 RAC3P60763 192 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 MERTKQ12866 999 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 FAM174BQ3ZCQ3 159 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 TIGD2Q4W5G0 525 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 GPAT3Q53EU6 434 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 SPANXN4Q5MJ08 99 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 Q5PR19 223 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 BIVMQ86UB2 503 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 ZNF563Q8TA94 476 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 MIPOL1Q8TD10 442 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 OIT3Q8WWZ8 545 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 SLC35A5Q9BS91 424 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 C20orf27Q9GZN8 174 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 SERHL2Q9H4I8 314 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 COQ10BQ9H8M1 238 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 HAO1Q9UJM8 370 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 RAB21Q9UL25 225 aa15.98■□□□□ 0.15
PNKP-225ENST00000636214 FREM1Q5H8C1 2179 aa15.97■□□□□ 0.15
PNKP-225ENST00000636214 A0A1W2PNR3 127 aa15.97■□□□□ 0.15
PNKP-225ENST00000636214 TRPC5OSA6NMA1 111 aa15.97■□□□□ 0.15
PNKP-225ENST00000636214 EFNA2O43921 213 aa15.97■□□□□ 0.15
PNKP-225ENST00000636214 KIAA0513O60268 411 aa15.97■□□□□ 0.15
PNKP-225ENST00000636214 ZNF500O60304 480 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms