RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 QPCTLQ9NXS2 382 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF586Q9NXT0 402 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 FETUBQ9UGM5 382 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 AMDHD2Q9Y303 409 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 UNC13BO14795 1591 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ADAMTS12P58397 1594 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 EEF1E1-BLOC1S5C9J1V9 151 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 GABRDO14764 452 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 MSI1O43347 362 aaKnown RBP5.69□□□□□ -1.5
SCN1A-212ENST00000636194 UGT2B7P16662 529 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 TYRP1P17643 537 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 GNB1P62873 340 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 EML3Q32P44 896 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 PPM1JQ5JR12 505 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF684Q5T5D7 378 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF585AQ6P3V2 769 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 GRINAQ7Z429 371 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ASPGQ86U10 573 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF595Q8IYB9 648 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 FAM71AQ8IYT1 594 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 EIF4E3Q8N5X7 224 aaKnown RBP5.69□□□□□ -1.5
SCN1A-212ENST00000636194 KLHDC1Q8N7A1 406 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 SLC24A4Q8NFF2 622 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 OR2T6Q8NHC8 308 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 LPPQ93052 612 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 HMCESQ96FZ2 354 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 PHOX2BQ99453 314 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 MRPS16Q9Y3D3 137 aaKnown RBP5.69□□□□□ -1.5
SCN1A-212ENST00000636194 MCRIP1C9JLW8 97 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 F5H5K5 113 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 K7ERU9 68 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SGK494L7N484 410 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SLC16A6O15403 523 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ASGR2P07307 311 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SELEP16581 610 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 NUDT1P36639 197 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SUOXP51687 545 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 TNK1Q13470 666 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 NADK2Q4G0N4 442 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SLC22A6Q4U2R8 563 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 RGMBQ6NW40 437 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 CDHR3Q6ZTQ4 885 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SLC35D2Q76EJ3 337 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 PIM3Q86V86 326 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 XYLT1Q86Y38 959 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 LSMEM1Q8N8F7 131 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ZCCHC14Q8WYQ9 949 aaKnown RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 KLK6Q92876 244 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 CHFRQ96EP1 664 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 HSPBAP1Q96EW2 488 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SGK494Q96LW2 274 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF641Q96N77 438 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 BEX1Q9HBH7 125 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 UGT2A1Q9Y4X1 527 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ASTN1O14525 1302 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 IRS2Q9Y4H2 1338 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SULT1A3P0DMM9 295 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SULT1A4P0DMN0 295 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 EN2P19622 333 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 RPS27AP62979 156 aaKnown RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 UBA52P62987 128 aaKnown RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 TEKQ02763 1124 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 BAXQ07812 192 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 NTRK3Q16288 839 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF628Q5EBL2 1059 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 AADACL3Q5VUY0 350 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 EEF1DP3Q658K8 133 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 MAP1SQ66K74 1059 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 MBLAC2Q68D91 279 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 NANOGP8Q6NSW7 305 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 METAP1DQ6UB28 335 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 GAREM2Q75VX8 874 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 RNF130Q86XS8 419 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 NPAS3Q8IXF0 933 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 FAM185AQ8N0U4 392 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 B3GNT7Q8NFL0 401 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 DEDD2Q8WXF8 326 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ASB9Q96DX5 294 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 FAM46AQ96IP4 442 aaKnown RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 MECRQ9BV79 373 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 OCEL1Q9H607 264 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 C11orf49Q9H6J7 331 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 EGLN3Q9H6Z9 239 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 EVA1AQ9H8M9 152 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 MRPL42Q9Y6G3 142 aaKnown RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ABCD4O14678 606 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 MAS1P04201 325 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 AKAIN1P0CW23 69 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 PROZP22891 400 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 PRKCIP41743 596 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 RPS10P46783 165 aaKnown RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 CSNK1A1P48729 337 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 BMXP51813 675 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 HNRNPA3P51991 378 aaKnown RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 HHEXQ03014 270 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 CDK5R2Q13319 367 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 PRRT3Q5FWE3 981 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 AMMECR1LQ6DCA0 310 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SIGIRRQ6IA17 410 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 GDPD3Q7L5L3 318 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms