RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 MBOAT2Q6ZWT7 520 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 ZNF367Q7RTV3 350 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 WDR53Q7Z5U6 358 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-230ENST00000634433 OR52R1Q8NGF1 315 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 SLC35B4Q969S0 331 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 MMABQ96EY8 250 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-230ENST00000634433 PEX11GQ96HA9 241 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 TMEM41AQ96HV5 264 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 SLC38A2Q96QD8 506 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 ZNF559Q9BR84 538 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 LMF2Q9BU23 707 aaKnown RBP6.62□□□□□ -1.35
BRCA1-230ENST00000634433 SEMA4GQ9NTN9 838 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 TMEM74BQ9NUR3 256 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 HCN3Q9P1Z3 774 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 CLEC4AQ9UMR7 237 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 PCDHGA5Q9Y5G8 931 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 PCDHGA1Q9Y5H4 931 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 ZNF749O43361 778 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 HCRTR1O43613 425 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 DYRK3O43781 588 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 DUX1O43812 170 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 PRAMEF2O60811 474 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 ZIC2O95409 532 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-230ENST00000634433 CBX7O95931 251 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 STSP08842 583 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 CD36P16671 472 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 ENDOUP21128 410 aaKnown RBP6.62□□□□□ -1.35
BRCA1-230ENST00000634433 FPR3P25089 353 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 SOX18P35713 384 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 SLC15A1P46059 708 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 GABRA4P48169 554 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 FNTBP49356 437 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 PCYT1AP49585 367 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 NUDT6P53370 316 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 GPLD1P80108 840 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 OCA2Q04671 838 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 IRF3Q14653 427 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 EXOSC7Q15024 291 aaKnown RBP6.62□□□□□ -1.35
BRCA1-230ENST00000634433 CTF1Q16619 201 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 DGUOKQ16854 277 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 KLHL22Q53GT1 634 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 RNLSQ5VYX0 342 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 SLC27A4Q6P1M0 643 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 SLC16A12Q6ZSM3 486 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 PRICKLE2Q7Z3G6 844 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 GDF7Q7Z4P5 450 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 HMGN2P46Q86SG4 172 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 BPHLQ86WA6 291 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-230ENST00000634433 CDK20Q8IZL9 346 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 LILRB4Q8NHJ6 448 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 STT3BQ8TCJ2 826 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 MVB12AQ96EY5 273 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 TMEM80Q96HE8 168 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 MS4A3Q96HJ5 214 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 HS6ST2Q96MM7 605 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 G6PC3Q9BUM1 346 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 FOLH1BQ9HBA9 442 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 TMEM27Q9HBJ8 222 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 AMBNQ9NP70 447 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 GPR83Q9NYM4 423 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 TAS2R3Q9NYW6 316 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 TVP23BQ9NYZ1 205 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 PRODH2Q9UF12 536 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 GPR55Q9Y2T6 319 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-230ENST00000634433 MMACHCQ9Y4U1 282 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 HEMK1Q9Y5R4 338 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-230ENST00000634433 RNF215Q9Y6U7 377 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 KNL1Q8NG31 2342 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 IGHV5-51A0A0C4DH38 117 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 HMX3A6NHT5 357 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 ENTPD6O75354 484 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 CLPXO76031 633 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 KCNK2O95069 426 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 HMGN1P05114 100 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 GLAP06280 429 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 CT62P0C5K7 136 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 GNSP15586 552 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 GLB1P16278 677 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 ZNF182P17025 639 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-230ENST00000634433 C21orf33P30042 268 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-230ENST00000634433 HOXA6P31267 233 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 CSTF2P33240 577 aaKnown RBP eCLIP6.61□□□□□ -1.35
BRCA1-230ENST00000634433 TRHRP34981 398 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-230ENST00000634433 OMPP47874 163 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 ARRB1P49407 418 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-230ENST00000634433 TUBA1BP68363 451 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 HSD11B2P80365 405 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 SNAPC1Q16533 368 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 TIMM50Q3ZCQ8 353 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 FLYWCH1Q4VC44 716 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 MED25Q71SY5 747 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 TUBA1AQ71U36 451 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 KMT5CQ86Y97 462 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 TCEANCQ8N8B7 351 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 OR7G1Q8NGA0 311 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 OR51Q1Q8NH59 317 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 OIT3Q8WWZ8 545 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 PIK3R3Q92569 461 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 IL4I1Q96RQ9 567 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms