RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 TIMP4Q99727 224 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 ECSITQ9BQ95 431 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 CPPED1Q9BRF8 314 aaPredicted RBP6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 SPATA5L1Q9BVQ7 753 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 PRRG4Q9BZD6 226 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 RTN4RQ9BZR6 473 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 SLC38A1Q9H2H9 487 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 TMEM185BQ9H7F4 350 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 MTHFD2LQ9H903 347 aaPredicted RBP6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 A4GALTQ9NPC4 353 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 MED17Q9NVC6 651 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 SLC25A37Q9NYZ2 338 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 L3MBTL1Q9Y468 752 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 CNTRLQ7Z7A1 2325 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 ATMQ13315 3056 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 IGLV3-32A0A0A0MS00 114 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 A0A0G2JPF8 293 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 CENPVL1A0A0U1RR11 272 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 OR2M5A3KFT3 312 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 AGAP5A6NIR3 686 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 GJE1A6NN92 205 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 FAM90A27PA6NNH2 459 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 AHRRA9YTQ3 701 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 HNRNPCL2B2RXH8 293 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 HNRNPCL3B7ZW38 293 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 NPIPB9F8W1W9 429 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 EIF1AYO14602 144 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 AIM2O14862 343 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 SNX3O60493 162 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 EIF4E2O60573 245 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 HNRNPCL1O60812 293 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 ADAM11O75078 769 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 DCTN3O75935 186 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 SYNGR4O95473 234 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 LDLRP01130 860 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 IGLV1-40P01703 118 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 LINGO3P0C6S8 592 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 HNRNPCL4P0DMR1 293 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 TFPIP10646 304 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 GP1BBP13224 206 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 ZNF17P17021 662 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 DRD4P21917 467 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 AQP1P29972 269 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 SFTPDP35247 375 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 EIF1P41567 113 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 SLC6A8P48029 635 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 STARP49675 285 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 NUDT2P50583 147 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 NUP107P57740 925 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 KCNJ10P78508 379 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 MXRA7P84157 204 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 CDK6Q00534 326 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 FOXF1Q12946 379 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 SCARB2Q14108 478 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 QPRTQ15274 297 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 PLPPR5Q32ZL2 321 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 GLYR1Q49A26 553 aaPredicted RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 ACSF3Q4G176 576 aaPredicted RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 ZNF311Q5JNZ3 666 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 DCST1Q5T197 706 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 PDSS1Q5T2R2 415 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 MRPL2Q5T653 305 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 GKAP1Q5VSY0 366 aaPredicted RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 VASNQ6EMK4 673 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 REEP3Q6NUK4 255 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 XKRXQ6PP77 449 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 CBLN3Q6UW01 205 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 MTDHQ86UE4 582 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 LACC1Q8IV20 430 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 SLC30A8Q8IWU4 369 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 CMIPQ8IY22 773 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 ZNF440Q8IYI8 595 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 ULK2Q8IYT8 1036 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 ZNF808Q8N4W9 903 aaPredicted RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 DPP10Q8N608 796 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 ANKS4BQ8N8V4 417 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 OR5W2Q8NH69 310 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 RP9Q8TA86 221 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 UBASH3BQ8TF42 649 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 PHF10Q8WUB8 498 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 UTP4Q969X6 686 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 RCN3Q96D15 328 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 REXO5Q96IC2 774 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 ANKRD27Q96NW4 1050 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 ZNF607Q96SK3 696 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 TREX2Q9BQ50 279 aaPredicted RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 SLC39A3Q9BRY0 314 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 TRIM8Q9BZR9 551 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 PIF1Q9H611 641 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 SERINC1Q9NRX5 453 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 SLAMF8Q9P0V8 285 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 ZNF443Q9Y2A4 671 aaPredicted RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 ARL2BPQ9Y2Y0 163 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 IFT52Q9Y366 437 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 MRPS18CQ9Y3D5 142 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 ESPL1Q14674 2120 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 IGSF10Q6WRI0 2623 aa6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 NUP214P35658 2090 aaPredicted RBP6.53□□□□□ -1.36
NPLOC4-221ENST00000625705 PIEZO2Q9H5I5 2752 aa6.52□□□□□ -1.37
NPLOC4-221ENST00000625705 NBEAQ8NFP9 2946 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms