RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 OR12D1P0DN82 309 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 UQCRBP14927 111 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 PSMA4P25789 261 aaKnown RBP11.7□□□□□ -0.54
ATRX-208ENST00000622960 EPHA3P29320 983 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 RIPPLY3P57055 190 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 MPP2Q14168 576 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 CASP8Q14790 479 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 ZNF141Q15928 474 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 CTU2Q2VPK5 515 aaKnown RBP11.7□□□□□ -0.54
ATRX-208ENST00000622960 TMEM176BQ3YBM2 270 aaPredicted RBP11.7□□□□□ -0.54
ATRX-208ENST00000622960 SAXO2Q658L1 398 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 ZNF474Q6S9Z5 364 aaPredicted RBP11.7□□□□□ -0.54
ATRX-208ENST00000622960 CLEC4FQ8N1N0 589 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 ZNF619Q8N2I2 560 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 SLC43A2Q8N370 569 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 GOLGA6L1Q8N7Z2 621 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 POC1BQ8TC44 478 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 GPR119Q8TDV5 335 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 RNF128Q8TEB7 428 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 SLC25A43Q8WUT9 341 aaPredicted RBP11.7□□□□□ -0.54
ATRX-208ENST00000622960 RAB8BQ92930 207 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 ROPN1LQ96C74 230 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 MBD6Q96DN6 1003 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 ZHX1-C8orf76Q96EF9 292 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 ARSGQ96EG1 525 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 NEURL3Q96EH8 262 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 PIK3IP1Q96FE7 263 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 ZC3HAV1LQ96H79 300 aaKnown RBP11.7□□□□□ -0.54
ATRX-208ENST00000622960 CCDC115Q96NT0 180 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 THUMPD3Q9BV44 507 aaKnown RBP11.7□□□□□ -0.54
ATRX-208ENST00000622960 LAT2Q9GZY6 243 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 C12orf49Q9H741 205 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 RMND5AQ9H871 391 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 GP6Q9HCN6 339 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 PLSCR4Q9NRQ2 329 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 KLHL9Q9P2J3 617 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 LIPT1Q9Y234 373 aa11.7□□□□□ -0.54
ATRX-208ENST00000622960 TMEM247A6NEH6 219 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 SDHDO14521 159 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 ANKRD28O15084 1053 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 UGT2B17O75795 530 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 PRKD3O94806 890 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 KRT75O95678 551 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 CGAP01215 116 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 IL6P05231 212 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 PGRP06401 933 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 GUSBP08236 651 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 FPR1P21462 350 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 CRYGSP22914 178 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 AGTR1P30556 359 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 SLC6A8P48029 635 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 CASP9P55211 416 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 STX1BP61266 288 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 CSNK2A1P68400 391 aaPredicted RBP11.69□□□□□ -0.54
ATRX-208ENST00000622960 SKP2Q13309 424 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 GUSBP1Q15486 140 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 GSTA3Q16772 222 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 DEFB113Q30KQ7 82 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 NDUFAF6Q330K2 333 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 ZNF621Q6ZSS3 439 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 FCRLAQ7L513 359 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 ARFGAP2Q8N6H7 521 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 PIWIL2Q8TC59 973 aaKnown RBP11.69□□□□□ -0.54
ATRX-208ENST00000622960 WFIKKN1Q96NZ8 548 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 CXXC4Q9H2H0 198 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 LIME1Q9H400 295 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 SERHL2Q9H4I8 314 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.69□□□□□ -0.54
ATRX-208ENST00000622960 C6orf203Q9P0P8 240 aaPredicted RBP11.69□□□□□ -0.54
ATRX-208ENST00000622960 KLHL13Q9P2N7 655 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 CSMD2Q7Z408 3487 aa11.69□□□□□ -0.54
ATRX-208ENST00000622960 CCDC154A6NI56 674 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 RFXANKO14593 260 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 FCMRO60667 390 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 SNNO75324 88 aaPredicted RBP11.68□□□□□ -0.54
ATRX-208ENST00000622960 SLC22A3O75751 556 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 ALDOCP09972 364 aaKnown RBP11.68□□□□□ -0.54
ATRX-208ENST00000622960 TFPIP10646 304 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 CD99P14209 185 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 IL11P20809 199 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 ENPP1P22413 925 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 IL32P24001 234 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 FKBP2P26885 142 aaKnown RBP11.68□□□□□ -0.54
ATRX-208ENST00000622960 NR1H2P55055 460 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 WDR4P57081 412 aaKnown RBP11.68□□□□□ -0.54
ATRX-208ENST00000622960 UFM1P61960 85 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 MERTKQ12866 999 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 TIGD2Q4W5G0 525 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 SLC25A53Q5H9E4 307 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 HEPHL1Q6MZM0 1159 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 ZNF550Q7Z398 422 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 RNF130Q86XS8 419 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 DYDC1Q8WWB3 177 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 ROBO4Q8WZ75 1007 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 OR5B2Q96R09 309 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 NPAS1Q99742 590 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 WDR55Q9H6Y2 383 aaPredicted RBP11.68□□□□□ -0.54
ATRX-208ENST00000622960 TMBIM4Q9HC24 238 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 NGBQ9NPG2 151 aa11.68□□□□□ -0.54
ATRX-208ENST00000622960 BEX4Q9NWD9 120 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms