RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ZNF274Q96GC6 653 aaPredicted RBP3.1□□□□□ -1.91
BRCA1-229ENST00000621897 PPP1R16AQ96I34 528 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 RASL10BQ96S79 203 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 ACBD6Q9BR61 282 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF559Q9BR84 538 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 TMEM43Q9BTV4 400 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 FRMD8P1Q9BZ68 369 aaPredicted RBP3.1□□□□□ -1.91
BRCA1-229ENST00000621897 HDHD2Q9H0R4 259 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 MAGT1Q9H0U3 335 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 ZBP1Q9H171 429 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 TMEM185BQ9H7F4 350 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 CHRAC1Q9NRG0 131 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 YAE1D1Q9NRH1 226 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 ONECUT1Q9UBC0 465 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 RNF14Q9UBS8 474 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 RSPH14Q9UHP6 348 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 PACSIN2Q9UNF0 486 aaPredicted RBP3.1□□□□□ -1.91
BRCA1-229ENST00000621897 A0A087X0K7 114 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 TMEM129A0AVI4 362 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 C12orf71A8MTZ7 269 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF487B1APH4 448 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 NEDD8-MDP1E9PL57 170 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 HDAC3O15379 428 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 MYO1DO94832 1006 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 HNF1AP20823 631 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 PAICSP22234 425 aaKnown RBP3.09□□□□□ -1.91
BRCA1-229ENST00000621897 MARCKSP29966 332 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-229ENST00000621897 FHITP49789 147 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 CCNG1P51959 295 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 HMGCS2P54868 508 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 DAOAP59103 153 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 DSTNP60981 165 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 RPS15P62841 145 aaKnown RBP3.09□□□□□ -1.91
BRCA1-229ENST00000621897 CCZ1BP86790 482 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 CCZ1P86791 482 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-229ENST00000621897 CNTN2Q02246 1040 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 FUT7Q11130 342 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 CRMP1Q14194 572 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 GK2Q14410 553 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-229ENST00000621897 ABRAXAS2Q15018 415 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 RGS21Q2M5E4 152 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 TEX44Q53QW1 395 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 RABGAP1LQ5R372 815 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 AGAP6Q5VW22 663 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 NKAIN2Q5VXU1 208 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 RAET1LQ5VY80 246 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 PLCXD3Q63HM9 321 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 NIPAL3Q6P499 406 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 CBLN3Q6UW01 205 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 CD164L2Q6UWJ8 174 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF730Q6ZMV8 503 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 ADGRD2Q7Z7M1 963 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 LINC00523Q86TU6 105 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 LAX1Q8IWV1 398 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF491Q8N8L2 437 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 SIDT2Q8NBJ9 832 aaKnown RBP3.09□□□□□ -1.91
BRCA1-229ENST00000621897 OR13F1Q8NGS4 319 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 FAM81AQ8TBF8 368 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 PIBF1Q8WXW3 757 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 OSTF1Q92882 214 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 RAB1CQ92928 201 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 KIAA1143Q96AT1 154 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-229ENST00000621897 NUS1Q96E22 293 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 ELMO2Q96JJ3 720 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 ERGIC2Q96RQ1 377 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 CITED1Q99966 193 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 C17orf62Q9BQA9 187 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 CHRDL1Q9BU40 450 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 ANKRD60Q9BZ19 345 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF665Q9H7R5 613 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 SGK2Q9HBY8 427 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 MRPL17Q9NRX2 175 aaKnown RBP3.09□□□□□ -1.91
BRCA1-229ENST00000621897 NRBP2Q9NSY0 501 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 DDX28Q9NUL7 540 aaKnown RBP3.09□□□□□ -1.91
BRCA1-229ENST00000621897 NDUFA13Q9P0J0 144 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 PDP1Q9P0J1 537 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-229ENST00000621897 IL17CQ9P0M4 197 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 UXTQ9UBK9 157 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-229ENST00000621897 CA5BQ9Y2D0 317 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 IFT52Q9Y366 437 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 PPIL1Q9Y3C6 166 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 ETV7Q9Y603 341 aa3.09□□□□□ -1.91
BRCA1-229ENST00000621897 CARMIL1Q5VZK9 1371 aa3.09□□□□□ -1.92
BRCA1-229ENST00000621897 TRAV26-1A0A087WT03 109 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 KLF18A0A0U1RQI7 1052 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 A0A1W2PPV4 95 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 FAM220BPB1ANY3 271 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 CDX4O14627 284 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-229ENST00000621897 ADAM12O43184 909 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 RNF13O43567 381 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 GRAP2O75791 330 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 CABYRO75952 493 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 OR5F1O95221 314 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 RPSAP08865 295 aaKnown RBP3.08□□□□□ -1.92
BRCA1-229ENST00000621897 ALPIP09923 528 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 MCF2P10911 925 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 PNMTP11086 282 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 PPP2R1AP30153 589 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 EVI2BP34910 448 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 HMGCLP35914 325 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms