RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 UBDO15205 165 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 ESRRBO95718 433 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 PLAUP00749 431 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 ALDOCP09972 364 aaKnown RBP7.02□□□□□ -1.29
CLK1-215ENST00000621181 CT45A8P0DMV1 189 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 CT45A9P0DMV2 189 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 HK1P19367 917 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 EVI2BP34910 448 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 MRPL19P49406 292 aaKnown RBP7.02□□□□□ -1.29
CLK1-215ENST00000621181 SUCLG1P53597 346 aaKnown RBP7.02□□□□□ -1.29
CLK1-215ENST00000621181 PNLIPRP2P54317 469 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 CLDN15P56746 228 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 B3GALT5-AS1P59052 145 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 RPS3AP61247 264 aaKnown RBP7.02□□□□□ -1.29
CLK1-215ENST00000621181 RPS4XP62701 263 aaKnown RBP7.02□□□□□ -1.29
CLK1-215ENST00000621181 TXNL4AP83876 142 aaKnown RBP7.02□□□□□ -1.29
CLK1-215ENST00000621181 DUSP2Q05923 314 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 KRTAP1-1Q07627 177 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 STX5Q13190 355 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 GANABQ14697 944 aaKnown RBP7.02□□□□□ -1.29
CLK1-215ENST00000621181 ETFDHQ16134 617 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 CT45A2Q5DJT8 189 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 ALKBH2Q6NS38 261 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 SLC44A2Q8IWA5 706 aaPredicted RBP7.02□□□□□ -1.29
CLK1-215ENST00000621181 PHC2Q8IXK0 858 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 CCDC116Q8IYX3 515 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 METTL25Q8N6Q8 603 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 ZNF611Q8N823 705 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 FAM156AQ8NDB6 213 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 IGFBPL1Q8WX77 278 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 TMEM158Q8WZ71 300 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 TRMT61AQ96FX7 289 aaKnown RBP7.02□□□□□ -1.29
CLK1-215ENST00000621181 C3orf30Q96M34 536 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 LRGUKQ96M69 825 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 PRRG4Q9BZD6 226 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 DSN1Q9H410 356 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 PTGES2Q9H7Z7 377 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 FANCFQ9NPI8 374 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 NDUFA13Q9P0J0 144 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 EMC9Q9Y3B6 208 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 ZNF337Q9Y3M9 751 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 LINC01387J3KSC0 135 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 KLF4O43474 513 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 TSPAN2O60636 221 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 NME6O75414 186 aaPredicted RBP7.01□□□□□ -1.29
CLK1-215ENST00000621181 AQP8O94778 261 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 THBDP07204 575 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 RPL5P46777 297 aaKnown RBP7.01□□□□□ -1.29
CLK1-215ENST00000621181 HSPA13P48723 471 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 GAS1P54826 345 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 CTBP2P56545 445 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 CLDN20P56880 219 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 PSPHP78330 225 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 CAPRIN1Q14444 709 aaKnown RBP7.01□□□□□ -1.29
CLK1-215ENST00000621181 MAPRE2Q15555 327 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 AGKQ53H12 422 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 STAC2Q6ZMT1 411 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 MILR1Q7Z6M3 343 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 SATL1Q86VE3 508 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 CARM1Q86X55 608 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 WFDC8Q8IUA0 241 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 PTGR2Q8N8N7 351 aaPredicted RBP7.01□□□□□ -1.29
CLK1-215ENST00000621181 OR5M1Q8NGP8 315 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 ZNF675Q8TD23 568 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 AKAP1Q92667 903 aaKnown RBP eCLIP7.01□□□□□ -1.29
CLK1-215ENST00000621181 KAT2AQ92830 837 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 GTPBP3Q969Y2 492 aaKnown RBP7.01□□□□□ -1.29
CLK1-215ENST00000621181 TM4SF18Q96CE8 201 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 VSTM2LQ96N03 204 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 ZNF681Q96N22 645 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 NSUN5Q96P11 429 aaKnown RBP7.01□□□□□ -1.29
CLK1-215ENST00000621181 NTMT1Q9BV86 223 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 REG4Q9BYZ8 158 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 ACTR6Q9GZN1 396 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 PCDHAC1Q9H158 963 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 SDHAF3Q9NRP4 125 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 FARSBQ9NSD9 589 aaKnown RBP7.01□□□□□ -1.29
CLK1-215ENST00000621181 TAS2R9Q9NYW1 312 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 MED11Q9P086 117 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 ABCD2Q9UBJ2 740 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 PCNX3Q9H6A9 2034 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 OR2M5A3KFT3 312 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 FXYD1O00168 92 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 PPP6CO00743 305 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 TLX2O43763 284 aaPredicted RBP7.01□□□□□ -1.29
CLK1-215ENST00000621181 SOX30O94993 753 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 SLC7A1P30825 629 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 EIF1AXP47813 144 aaKnown RBP7.01□□□□□ -1.29
CLK1-215ENST00000621181 TRAF3Q13114 568 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 GUSBP1Q15486 140 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 ZNF628Q5EBL2 1059 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 C6orf52Q5T4I8 152 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 KANK2Q63ZY3 851 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 CLEC6AQ6EIG7 209 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 NPSR1Q6W5P4 371 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 STK32CQ86UX6 486 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 SAMD14Q8IZD0 417 aaPredicted RBP7.01□□□□□ -1.29
CLK1-215ENST00000621181 C1orf52Q8N6N3 182 aaKnown RBP7.01□□□□□ -1.29
CLK1-215ENST00000621181 ANKFN1Q8N957 763 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 FADS6Q8N9I5 356 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms