RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 SP5Q6BEB4 398 aaPredicted RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 DNAJC14Q6Y2X3 702 aaPredicted RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 CCDC71Q8IV32 467 aaPredicted RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 C9orf106Q8NAJ2 232 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 OR5M1Q8NGP8 315 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 PNPT1Q8TCS8 783 aaKnown RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 ST8SIA1Q92185 356 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 SLC35B4Q969S0 331 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 SDCCAG3Q96C92 435 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 SH3YL1Q96HL8 342 aaPredicted RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 MRGPRX4Q96LA9 322 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 ANKRD27Q96NW4 1050 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 SPOCK3Q9BQ16 436 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 CPPED1Q9BRF8 314 aaPredicted RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 QRSL1Q9H0R6 528 aaKnown RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 RAD21L1Q9H4I0 556 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 RNF122Q9H9V4 155 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 CHST11Q9NPF2 352 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 NPDC1Q9NQX5 325 aaPredicted RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 DNAJB12Q9NXW2 375 aaKnown RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 CALML5Q9NZT1 146 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 P2RX2Q9UBL9 471 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 LEF1Q9UJU2 399 aaPredicted RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 VDAC3Q9Y277 283 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 NDUFAF1Q9Y375 327 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 ZNF175Q9Y473 711 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 CDHR4A6H8M9 788 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 CLDN24A6NM45 220 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 H0Y3Z8 333 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 H0YC42 278 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 FXYD1O00168 92 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 SYT5O00445 386 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 TNFSF13O75888 250 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 TGM6O95932 706 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 CSTAP01040 98 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 NPPAP01160 153 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 CRHP06850 196 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 ARAFP10398 606 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 NR2F1P10589 423 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 POU3F2P20265 443 aaPredicted RBP7.42□□□□□ -1.22
NEK3-209ENST00000618856 COL8A1P27658 744 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 CRATP43155 626 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 GZMMP51124 257 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 ZNF41P51814 821 aaPredicted RBP7.42□□□□□ -1.22
NEK3-209ENST00000618856 CRISP3P54108 245 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 TPD52P55327 224 aaPredicted RBP7.42□□□□□ -1.22
NEK3-209ENST00000618856 FOXF1Q12946 379 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 KLF10Q13118 480 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 GNA13Q14344 377 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 QPRTQ15274 297 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 SLC25A35Q3KQZ1 300 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 GPAT3Q53EU6 434 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 EEF1A1P5Q5VTE0 462 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 HIST2H2BCQ6DN03 193 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 ESPNLQ6ZVH7 1005 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 NET1Q7Z628 596 aaPredicted RBP7.42□□□□□ -1.22
NEK3-209ENST00000618856 MEIOBQ8N635 442 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 RELL2Q8NC24 303 aaPredicted RBP7.42□□□□□ -1.22
NEK3-209ENST00000618856 FBXO27Q8NI29 283 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 CA5BP1Q8WTZ4 195 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 TMEM19Q96HH6 336 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 RNF145Q96MT1 663 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 TRIB1Q96RU8 372 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 TM9SF2Q99805 663 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.42□□□□□ -1.22
NEK3-209ENST00000618856 ACER3Q9NUN7 267 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 PAQR5Q9NXK6 330 aaPredicted RBP7.42□□□□□ -1.22
NEK3-209ENST00000618856 ALKBH4Q9NXW9 302 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 FAM53CQ9NYF3 392 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 CSMD2Q7Z408 3487 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 HCFC1P51610 2035 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 PDZD2O15018 2839 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 CACNA1CQ13936 2221 aa7.42□□□□□ -1.22
NEK3-209ENST00000618856 AKAP9Q99996 3911 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 HEATR5AQ86XA9 2040 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 A0A0J9YW62 118 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 PRSS44E7EML9 344 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 H3BML4 177 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 GTPBP1O00178 669 aaKnown RBP7.41□□□□□ -1.22
NEK3-209ENST00000618856 GCM2O75603 506 aaPredicted RBP7.41□□□□□ -1.22
NEK3-209ENST00000618856 PGM3O95394 542 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 IL2RAP01589 272 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 BCHEP06276 602 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 ETS2P15036 469 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 CTSSP25774 331 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 SHC1P29353 583 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 ACAA2P42765 397 aaKnown RBP7.41□□□□□ -1.22
NEK3-209ENST00000618856 SLC6A8P48029 635 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 RNF144AP50876 292 aaPredicted RBP7.41□□□□□ -1.22
NEK3-209ENST00000618856 PCBP3P57721 371 aaKnown RBP7.41□□□□□ -1.22
NEK3-209ENST00000618856 SESN3P58005 492 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 HPCAP84074 193 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 EPS8Q12929 822 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 FOXF2Q12947 444 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 OR2A2Q6IF42 318 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 ZNF836Q6ZNA1 936 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 PLEKHM3Q6ZWE6 761 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 DHDDSQ86SQ9 333 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 SERPINA11Q86U17 422 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 PTOV1Q86YD1 416 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms