RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ADAT1Q9BUB4 502 aaKnown RBP12.25□□□□□ -0.45
MSH6-214ENST00000616033 ACOD1A6NK06 481 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 HOXB3P14651 431 aaPredicted RBP12.25□□□□□ -0.45
MSH6-214ENST00000616033 ADH7P40394 386 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 ID2Q02363 134 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 LTB4RQ15722 352 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 NDUFA9Q16795 377 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 ZDHHC20Q5W0Z9 365 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 ZNF454Q8N9F8 522 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 OR52I2Q8NH67 350 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 GRHL3Q8TE85 626 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 ZMYND19Q96E35 227 aaPredicted RBP12.25□□□□□ -0.45
MSH6-214ENST00000616033 NDC1Q9BTX1 674 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 TMEM168Q9H0V1 697 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 STON1Q9Y6Q2 735 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 A0A1B0GVI7 797 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 A0A1W2PQ45 241 aaPredicted RBP12.25□□□□□ -0.45
MSH6-214ENST00000616033 A0A1W2PQY0 241 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 IRGMA1A4Y4 181 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 CXCL14O95715 111 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 MMP12P39900 470 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 MC3RP41968 323 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 TSPAN31Q12999 210 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 CD200R1LQ6Q8B3 271 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 PFN4Q8NHR9 129 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 ZNF461Q8TAF7 563 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 DNAJA3Q96EY1 480 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 CASD1Q96PB1 797 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 DEFB118Q96PH6 123 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 MNTQ99583 582 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 SPSB2Q99619 263 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 C6orf106Q9H6K1 298 aaPredicted RBP12.25□□□□□ -0.45
MSH6-214ENST00000616033 NEUROD4Q9HD90 331 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 NDOR1Q9UHB4 597 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 GPR160Q9UJ42 338 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 SPEGQ15772 3267 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 CDHR4A6H8M9 788 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 TMEM189-UBE2V1I3L0A0 370 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 NRG2O14511 850 aaPredicted RBP12.24□□□□□ -0.45
MSH6-214ENST00000616033 KIAA0355O15063 1070 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 DRD2P14416 443 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 SOX2P48431 317 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 ST3GAL3Q11203 375 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 STX4Q12846 297 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 RPE65Q16518 533 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 AADACL4Q5VUY2 407 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 CORO6Q6QEF8 472 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 OR51Q1Q8NH59 317 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 C1orf216Q8TAB5 229 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 ACOT12Q8WYK0 555 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 NPAS1Q99742 590 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 UBQLN3Q9H347 655 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 NIT2Q9NQR4 276 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 ACTR10Q9NZ32 417 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 NTMQ9P121 344 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 SLC5A10A0PJK1 596 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 F8W036 122 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 H7C2Y5 167 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 KHNYNO15037 678 aaKnown RBP12.24□□□□□ -0.45
MSH6-214ENST00000616033 RPP14O95059 124 aaKnown RBP12.24□□□□□ -0.45
MSH6-214ENST00000616033 IGF2P01344 180 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 NFYAP23511 347 aaPredicted RBP12.24□□□□□ -0.45
MSH6-214ENST00000616033 DCTDP32321 178 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 EPHB3P54753 998 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 C21orf58P58505 322 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 DUSP2Q05923 314 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 NOGQ13253 232 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 PAN3Q58A45 887 aaKnown RBP12.24□□□□□ -0.45
MSH6-214ENST00000616033 TMEM150AQ86TG1 271 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 CPXM2Q8N436 756 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 OR5M1Q8NGP8 315 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 OR2A12Q8NGT7 310 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 OR8S1Q8NH09 359 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 MICU1Q9BPX6 476 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 CRB3Q9BUF7 120 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 KLHL31Q9H511 634 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 NOX3Q9HBY0 568 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 MRPL17Q9NRX2 175 aaKnown RBP12.24□□□□□ -0.45
MSH6-214ENST00000616033 MARK1Q9P0L2 795 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 POMT2Q9UKY4 750 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 MKL2Q9ULH7 1088 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 OR10H1Q9Y4A9 318 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 BACE2Q9Y5Z0 518 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 HEATR5BQ9P2D3 2071 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 ERI3O43414 337 aaKnown RBP12.24□□□□□ -0.45
MSH6-214ENST00000616033 LCMT2O60294 686 aaKnown RBP12.24□□□□□ -0.45
MSH6-214ENST00000616033 SULT1A3P0DMM9 295 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 SULT1A4P0DMN0 295 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 NDUFV2P19404 249 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 NTSP30990 170 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 MTNR1BP49286 362 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 HEPHL1Q6MZM0 1159 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 FCRLAQ7L513 359 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 SSX6Q7RTT6 188 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 HDDC3Q8N4P3 179 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 OR52L1Q8NGH7 329 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 OR56B4Q8NH76 319 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 OSTF1Q92882 214 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 OR52D1Q9H346 318 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 SYNPO2LQ9H987 977 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms