RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 SLC22A14Q9Y267 594 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 TSC2P49815 1807 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 GAPDHSO14556 408 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 CYB5BO43169 146 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF623O75123 536 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 STAG3L2P0CL84 134 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ATP5IP56385 69 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 LYPD4Q6UWN0 246 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 GPR137CQ8N3F9 429 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 C2CD4AQ8NCU7 369 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 LINC01599Q8WXQ3 324 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 HRASLS5Q96KN8 279 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 DUSP26Q9BV47 211 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 GPR160Q9UJ42 338 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ARNTLO00327 626 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 CYR61O00622 381 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 OR10J4P0C629 311 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 PIPP12273 146 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ATP5A1P25705 553 aaKnown RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 IL13RA1P78552 427 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 C6orf136Q5SQH8 315 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 OR2W3Q7Z3T1 314 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF467Q7Z7K2 595 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 FAM122AQ96E09 287 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 CMTM7Q96FZ5 175 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 RHBGQ9H310 441 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 PHIPQ8WWQ0 1821 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 XKRYO14609 159 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 MPIP34949 423 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SMAD4Q13485 552 aaKnown RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 CHRFAM7AQ494W8 412 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 XAF1Q6GPH4 301 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 S100A7AQ86SG5 101 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 L3MBTL4Q8NA19 623 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 FBXO22Q8NEZ5 403 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 C5orf34Q96MH7 638 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 GDF2Q9UK05 429 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ZDHHC8Q9ULC8 765 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SLC22A7Q9Y694 548 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 BRWD3Q6RI45 1802 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 BRCA1P38398 1863 aaKnown RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 OR4E1P0C645 316 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ALPPL2P10696 532 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 PYCR1P32322 319 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 MFSD14CQ5VZR4 134 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 C19orf35Q6ZS72 473 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ABHD12BQ7Z5M8 362 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 KIAA0319LQ8IZA0 1049 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 TMEM86AQ8N2M4 240 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 PSMF1Q92530 271 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ZC3HAV1LQ96H79 300 aaKnown RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 FOXN4Q96NZ1 517 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ELL3Q9HB65 397 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 TLR9Q9NR96 1032 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 THSD1Q9NS62 852 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 C2CD4BA6NLJ0 364 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 RAMP2O60895 175 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 EPXP11678 715 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 AKR1C4P17516 323 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 RGS8P57771 180 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ERVFRD-1P60508 538 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ELFN2Q5R3F8 820 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 UNC93AQ86WB7 457 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 LRRC56Q8IYG6 542 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 OR51L1Q8NGJ5 315 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 FBXO32Q969P5 355 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 TIMM29Q9BSF4 260 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 OR51I1Q9H343 314 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 MFSD1Q9H3U5 465 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF552Q9H707 407 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 XKRY2A2RUG3 117 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SMIM30A4D0T7 59 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 NFATC1O95644 943 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 NFATC4Q14934 902 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ATP6V1FQ16864 119 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 CATSPEREQ5SY80 951 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 NETO2Q8NC67 525 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SUN3Q8TAQ9 357 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SENP5Q96HI0 755 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 PCDHB10Q9UN67 800 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 NFASCO94856 1347 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 OR5H15A6NDH6 313 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 OR5H1A6NKK0 313 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SLC35G4P0C7Q5 338 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 CMPK1P30085 196 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 OR10J1P30954 320 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 TLX1P31314 330 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 PBX2P40425 430 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 HYAL2Q12891 473 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 HSD17B11Q8NBQ5 300 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 FNDC9Q8TBE3 224 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 FRZBQ92765 325 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 TSPAN16Q9UKR8 245 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 POLR2AP24928 1970 aaKnown RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 A0A1B0GWJ7 208 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 CLN5O75503 358 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 CNOT4O95628 575 aaKnown RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 GOT2P00505 430 aaKnown RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 CSTAP01040 98 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms