RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 TP53TG5Q9Y2B4 290 aa8.27□□□□□ -1.08
TTC28-208ENST00000612946 BCL2L11O43521 198 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 CH25HO95992 272 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 PMPCAQ10713 525 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 ETV3LQ6ZN32 361 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 SCLYQ96I15 445 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 DOK1Q99704 481 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 ANKRD19PQ9H560 264 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 PARPBPQ9NWS1 579 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 PCDHA9Q9Y5H5 950 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 NUDT21O43809 227 aaKnown RBP8.27□□□□□ -1.09
TTC28-208ENST00000612946 GALP22466 123 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 RAB7AP51149 207 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 SOX10P56693 466 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 SFXN4Q6P4A7 337 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 H7BYZ3 331 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 I6L893 689 aaPredicted RBP8.27□□□□□ -1.09
TTC28-208ENST00000612946 HOXD11P31277 338 aaPredicted RBP8.27□□□□□ -1.09
TTC28-208ENST00000612946 ACVR1BP36896 505 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 MRPL19P49406 292 aaKnown RBP8.27□□□□□ -1.09
TTC28-208ENST00000612946 SPO11Q9Y5K1 396 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 TCAPO15273 167 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 CALCBP10092 127 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 ATP1B2P14415 290 aaPredicted RBP8.27□□□□□ -1.09
TTC28-208ENST00000612946 EXOSC2Q13868 293 aaKnown RBP8.27□□□□□ -1.09
TTC28-208ENST00000612946 CDONQ4KMG0 1287 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 FRMD1Q8N878 549 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 GPR150Q8NGU9 434 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 TAF9BQ9HBM6 251 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 RCE1Q9Y256 329 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 SPATA31A1Q5TZJ5 1347 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 BLACEA4D250 179 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 GPLD1P80108 840 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 CAMK2BQ13554 666 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 UBAC2Q8NBM4 344 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 HBEGFQ99075 208 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 SLC6A14Q9UN76 642 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 NIPSNAP2O75323 286 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 POP7O75817 140 aaKnown RBP8.27□□□□□ -1.09
TTC28-208ENST00000612946 ABHD16AO95870 558 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 GJB1P08034 283 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 GPX3P22352 226 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 OR2B8PP59922 312 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 MDGA2Q7Z553 956 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 SIAH3Q8IW03 269 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 GCNT2Q8N0V5 402 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 CABLES2Q9BTV7 478 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 NXF2Q9GZY0 626 aaKnown RBP8.27□□□□□ -1.09
TTC28-208ENST00000612946 IL21RQ9HBE5 538 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 GPSM3Q9Y4H4 160 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 DNAJC15Q9Y5T4 150 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 UNC13CQ8NB66 2214 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 HSPB2A8KAH6 182 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 E5RGE8 158 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 RFC3P40938 356 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 HSPB2Q16082 182 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 RPE65Q16518 533 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 RGL4Q8IZJ4 473 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 BRI3BPQ8WY22 251 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 CCNL2Q96S94 520 aaPredicted RBP8.27□□□□□ -1.09
TTC28-208ENST00000612946 FAM83CQ9BQN1 747 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 PPP1R14DQ9NXH3 145 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 RPLP1P05386 114 aaKnown RBP8.27□□□□□ -1.09
TTC28-208ENST00000612946 ALPIP09923 528 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 UBE2MP61081 183 aaKnown RBP8.27□□□□□ -1.09
TTC28-208ENST00000612946 ERVK-16P61578 105 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 NETO2Q8NC67 525 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 ZNF439Q8NDP4 499 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 TFAP2BQ92481 460 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 DGAT2Q96PD7 388 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 C1QTNF2Q9BXJ5 285 aa8.27□□□□□ -1.09
TTC28-208ENST00000612946 NSUN3Q9H649 340 aaKnown RBP8.27□□□□□ -1.09
TTC28-208ENST00000612946 MTMR11A4FU01 709 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 CXCL11O14625 94 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 PRPH2P23942 346 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 SRP9P49458 86 aaKnown RBP8.26□□□□□ -1.09
TTC28-208ENST00000612946 ADIRFQ15847 76 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 SBSNQ6UWP8 590 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 ST8SIA2Q92186 375 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 NARFLQ9H6Q4 476 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 TK1P04183 234 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 MASP1P48740 699 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 DHPSP49366 369 aaPredicted RBP8.26□□□□□ -1.09
TTC28-208ENST00000612946 MAP2K5Q13163 448 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 ADPRMQ3LIE5 342 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 LRRN4Q8WUT4 740 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 CPNE4Q96A23 557 aaPredicted RBP8.26□□□□□ -1.09
TTC28-208ENST00000612946 OR51I2Q9H344 312 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 PSAT1Q9Y617 370 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 A0A1B0GVT2 93 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 AP4M1O00189 453 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 KDELR3O43731 214 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 OLFM2O95897 454 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 BDKRB1P46663 353 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 EPHA4P54764 986 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 KDM4DQ6B0I6 523 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 IGDCC3Q8IVU1 814 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 SMPDL3BQ92485 455 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 SLC22A14Q9Y267 594 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 ZNF681Q96N22 645 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms