RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 FRMD7Q6ZUT3 714 aa20.64■□□□□ 0.89
MMP28-203ENST00000612672 SLC43A2Q8N370 569 aa20.64■□□□□ 0.89
MMP28-203ENST00000612672 JADE3Q92613 823 aa20.64■□□□□ 0.89
MMP28-203ENST00000612672 TSSK3Q96PN8 268 aa20.64■□□□□ 0.89
MMP28-203ENST00000612672 DHRS9Q9BPW9 319 aa20.64■□□□□ 0.89
MMP28-203ENST00000612672 USB1Q9BQ65 265 aaKnown RBP20.64■□□□□ 0.89
MMP28-203ENST00000612672 BTBD2Q9BX70 525 aa20.64■□□□□ 0.89
MMP28-203ENST00000612672 REEP4Q9H6H4 257 aa20.64■□□□□ 0.89
MMP28-203ENST00000612672 HHATLQ9HCP6 504 aa20.64■□□□□ 0.89
MMP28-203ENST00000612672 KLHL9Q9P2J3 617 aa20.64■□□□□ 0.89
MMP28-203ENST00000612672 BAIAP2L1Q9UHR4 511 aa20.64■□□□□ 0.89
MMP28-203ENST00000612672 ACTL7BQ9Y614 415 aa20.64■□□□□ 0.89
MMP28-203ENST00000612672 A0A087WUV0 522 aaPredicted RBP20.63■□□□□ 0.89
MMP28-203ENST00000612672 EXOC1LA0A1B0GW35 172 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 OR5H1A6NKK0 313 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 ESPNB1AK53 854 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 CYTIPO60759 359 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 TBX19O60806 448 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 SEC22BO75396 215 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 IGHV3-9P01782 118 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 SLC25A16P16260 332 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 GGT1P19440 569 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 PRPH2P23942 346 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 ZNF83P51522 516 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 FOXG1P55316 489 aaPredicted RBP20.63■□□□□ 0.89
MMP28-203ENST00000612672 RAC3P60763 192 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 RASGEF1BQ0VAM2 473 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 LASP1Q14847 261 aaKnown RBP20.63■□□□□ 0.89
MMP28-203ENST00000612672 MUC15Q8N387 334 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 MZB1Q8WU39 189 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 PPCDCQ96CD2 204 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 FMO2Q99518 471 aa20.63■□□□□ 0.89
MMP28-203ENST00000612672 GPC6Q9Y625 555 aaPredicted RBP20.63■□□□□ 0.89
MMP28-203ENST00000612672 NPIPB9F8W1W9 429 aa20.62■□□□□ 0.89
MMP28-203ENST00000612672 KIF2AO00139 706 aaPredicted RBP20.62■□□□□ 0.89
MMP28-203ENST00000612672 RAD51DO75771 328 aa20.62■□□□□ 0.89
MMP28-203ENST00000612672 HMGN2P05204 90 aaKnown RBP20.62■□□□□ 0.89
MMP28-203ENST00000612672 NTF4P34130 210 aa20.62■□□□□ 0.89
MMP28-203ENST00000612672 SERPINB4P48594 390 aa20.62■□□□□ 0.89
MMP28-203ENST00000612672 DSCR9P59020 149 aa20.62■□□□□ 0.89
MMP28-203ENST00000612672 SELENBP1Q13228 472 aa20.62■□□□□ 0.89
MMP28-203ENST00000612672 SLC25A53Q5H9E4 307 aa20.62■□□□□ 0.89
MMP28-203ENST00000612672 MTERF4Q7Z6M4 381 aaKnown RBP20.62■□□□□ 0.89
MMP28-203ENST00000612672 OR52N5Q8NH56 324 aa20.62■□□□□ 0.89
MMP28-203ENST00000612672 ZFP28Q8NHY6 868 aa20.62■□□□□ 0.89
MMP28-203ENST00000612672 FAM168AQ92567 244 aa20.62■□□□□ 0.89
MMP28-203ENST00000612672 MUCL1Q96DR8 90 aa20.62■□□□□ 0.89
MMP28-203ENST00000612672 SHARPINQ9H0F6 387 aa20.62■□□□□ 0.89
MMP28-203ENST00000612672 QRSL1Q9H0R6 528 aaKnown RBP20.62■□□□□ 0.89
MMP28-203ENST00000612672 L2HGDHQ9H9P8 463 aa20.62■□□□□ 0.89
MMP28-203ENST00000612672 SH3BP4Q9P0V3 963 aa20.62■□□□□ 0.89
MMP28-203ENST00000612672 SLC25A15Q9Y619 301 aa20.62■□□□□ 0.89
MMP28-203ENST00000612672 GJE1A6NN92 205 aa20.61■□□□□ 0.89
MMP28-203ENST00000612672 HAX1O00165 279 aa20.61■□□□□ 0.89
MMP28-203ENST00000612672 PYGBP11216 843 aa20.61■□□□□ 0.89
MMP28-203ENST00000612672 CYB5R2Q6BCY4 276 aa20.61■□□□□ 0.89
MMP28-203ENST00000612672 CDC73Q6P1J9 531 aa20.61■□□□□ 0.89
MMP28-203ENST00000612672 NOA1Q8NC60 698 aaKnown RBP20.61■□□□□ 0.89
MMP28-203ENST00000612672 RFWD2Q8NHY2 731 aa20.61■□□□□ 0.89
MMP28-203ENST00000612672 IFT81Q8WYA0 676 aa20.61■□□□□ 0.89
MMP28-203ENST00000612672 CCT7Q99832 543 aa20.61■□□□□ 0.89
MMP28-203ENST00000612672 TUBB1Q9H4B7 451 aa20.61■□□□□ 0.89
MMP28-203ENST00000612672 RRAGDQ9NQL2 400 aaPredicted RBP20.61■□□□□ 0.89
MMP28-203ENST00000612672 DUSP22Q9NRW4 184 aa20.61■□□□□ 0.89
MMP28-203ENST00000612672 ACSS1Q9NUB1 689 aaPredicted RBP20.61■□□□□ 0.89
MMP28-203ENST00000612672 C1orf109Q9NX04 203 aa20.61■□□□□ 0.89
MMP28-203ENST00000612672 LPAR3Q9UBY5 353 aa20.61■□□□□ 0.89
MMP28-203ENST00000612672 H7C417 338 aa20.6■□□□□ 0.89
MMP28-203ENST00000612672 ETV2O00321 342 aaPredicted RBP20.6■□□□□ 0.89
MMP28-203ENST00000612672 LMX1BO60663 402 aa20.6■□□□□ 0.89
MMP28-203ENST00000612672 CD40P25942 277 aa20.6■□□□□ 0.89
MMP28-203ENST00000612672 SLC7A1P30825 629 aa20.6■□□□□ 0.89
MMP28-203ENST00000612672 SUMO3P55854 103 aaPredicted RBP20.6■□□□□ 0.89
MMP28-203ENST00000612672 ETF1P62495 437 aaKnown RBP20.6■□□□□ 0.89
MMP28-203ENST00000612672 CHRNEQ04844 493 aa20.6■□□□□ 0.89
MMP28-203ENST00000612672 QPRTQ15274 297 aa20.6■□□□□ 0.89
MMP28-203ENST00000612672 RAB35Q15286 201 aa20.6■□□□□ 0.89
MMP28-203ENST00000612672 RFTN2Q52LD8 501 aaPredicted RBP20.6■□□□□ 0.89
MMP28-203ENST00000612672 ZCCHC12Q6PEW1 402 aa20.6■□□□□ 0.89
MMP28-203ENST00000612672 SLC22A25Q6T423 547 aa20.6■□□□□ 0.89
MMP28-203ENST00000612672 ZYG11AQ6WRX3 759 aa20.6■□□□□ 0.89
MMP28-203ENST00000612672 LCA5Q86VQ0 697 aa20.6■□□□□ 0.89
MMP28-203ENST00000612672 MRGPRX4Q96LA9 322 aa20.6■□□□□ 0.89
MMP28-203ENST00000612672 STACQ99469 402 aa20.6■□□□□ 0.89
MMP28-203ENST00000612672 AMBRA1Q9C0C7 1298 aa20.6■□□□□ 0.89
MMP28-203ENST00000612672 C12orf65Q9H3J6 166 aaKnown RBP20.6■□□□□ 0.89
MMP28-203ENST00000612672 PIGUQ9H490 435 aa20.6■□□□□ 0.89
MMP28-203ENST00000612672 CHODLQ9H9P2 273 aa20.6■□□□□ 0.89
MMP28-203ENST00000612672 ZCCHC3Q9NUD5 404 aaKnown RBP20.6■□□□□ 0.89
MMP28-203ENST00000612672 CENPVL1A0A0U1RR11 272 aa20.59■□□□□ 0.89
MMP28-203ENST00000612672 ZNF724A8MTY0 619 aa20.59■□□□□ 0.89
MMP28-203ENST00000612672 FABP6P51161 128 aa20.59■□□□□ 0.89
MMP28-203ENST00000612672 RPL38P63173 70 aaKnown RBP20.59■□□□□ 0.89
MMP28-203ENST00000612672 ARL13AQ5H913 290 aaPredicted RBP20.59■□□□□ 0.89
MMP28-203ENST00000612672 DCST2Q5T1A1 773 aa20.59■□□□□ 0.89
MMP28-203ENST00000612672 ABLIM2Q6H8Q1 611 aa20.59■□□□□ 0.89
MMP28-203ENST00000612672 FBXL14Q8N1E6 418 aa20.59■□□□□ 0.89
MMP28-203ENST00000612672 CHMP6Q96FZ7 201 aa20.59■□□□□ 0.89
MMP28-203ENST00000612672 OR5B2Q96R09 309 aa20.59■□□□□ 0.89
MMP28-203ENST00000612672 POU2F3Q9UKI9 436 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms