RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 MAPK14Q16539 360 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 MICBQ29980 383 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 SLC25A35Q3KQZ1 300 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 FAM209BQ5JX69 171 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 SLC25A25Q6KCM7 469 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 RTL10Q7L3V2 364 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 EID2Q8N6I1 236 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 ACBD7Q8N6N7 88 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 KREMEN2Q8NCW0 462 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 OR1M1Q8NGA1 313 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 OR6K3Q8NGY3 331 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 SLC5A11Q8WWX8 675 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 TRIM43Q96BQ3 446 aaPredicted RBP11.1□□□□□ -0.63
TP53-220ENST00000610623 ECHDC3Q96DC8 303 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 MED8Q96G25 268 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 UTP23Q9BRU9 249 aaKnown RBP11.1□□□□□ -0.63
TP53-220ENST00000610623 ANKRD19PQ9H560 264 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 ISG20L2Q9H9L3 353 aaKnown RBP11.1□□□□□ -0.63
TP53-220ENST00000610623 IL23AQ9NPF7 189 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 EXOSC3Q9NQT5 275 aaKnown RBP11.1□□□□□ -0.63
TP53-220ENST00000610623 ZNF69Q9UC07 566 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 CYB5R1Q9UHQ9 305 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 SIRT4Q9Y6E7 314 aaPredicted RBP11.1□□□□□ -0.63
TP53-220ENST00000610623 NEDD8-MDP1E9PL57 170 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 TEX46H3BTG2 121 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 GBAP04062 536 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 ITGB8P26012 769 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 DDX6P26196 483 aaKnown RBP eCLIP11.1□□□□□ -0.63
TP53-220ENST00000610623 MECP2P51608 486 aaKnown RBP11.1□□□□□ -0.63
TP53-220ENST00000610623 GMFBP60983 142 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 HTRA4P83105 476 aaPredicted RBP11.1□□□□□ -0.63
TP53-220ENST00000610623 E2F1Q01094 437 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 SQSTM1Q13501 440 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 PRSS53Q2L4Q9 553 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 CEACAM19Q7Z692 300 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 OR5W2Q8NH69 310 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 ABHD4Q8TB40 342 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 OR5P2Q8WZ92 322 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 OSTF1Q92882 214 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 TCEAL4Q96EI5 215 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 TREX2Q9BQ50 279 aaPredicted RBP11.1□□□□□ -0.63
TP53-220ENST00000610623 SEMA4CQ9C0C4 833 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 DDX31Q9H8H2 851 aaKnown RBP11.1□□□□□ -0.63
TP53-220ENST00000610623 NOX3Q9HBY0 568 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 MIEF1Q9NQG6 463 aa11.1□□□□□ -0.63
TP53-220ENST00000610623 MTCL1Q9Y4B5 1905 aaKnown RBP11.1□□□□□ -0.63
TP53-220ENST00000610623 M0R3H8 397 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 LEFTY2O00292 366 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 ARPC1BO15143 372 aaKnown RBP11.09□□□□□ -0.63
TP53-220ENST00000610623 ZNF749O43361 778 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 ASGR2P07307 311 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 ACRP10323 421 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 SERPINA4P29622 427 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 RAD52P43351 418 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 HAAOP46952 286 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 DLX5P56178 289 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 RPS26P62854 115 aaKnown RBP11.09□□□□□ -0.63
TP53-220ENST00000610623 ERVK-25P63136 954 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 LGALS3BPQ08380 585 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 OR56A3Q8NH54 315 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 ANAPC16Q96DE5 110 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 EAF1Q96JC9 268 aaPredicted RBP11.09□□□□□ -0.63
TP53-220ENST00000610623 HS3ST6Q96QI5 342 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 LYSMD1Q96S90 227 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 ALG8Q9BVK2 526 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 LINC00597Q9H2U6 94 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 BRD9Q9H8M2 597 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 TAAR2Q9P1P5 351 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 STOX2Q9P2F5 926 aaPredicted RBP11.09□□□□□ -0.63
TP53-220ENST00000610623 TRAV1-2A0A0B4J238 106 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 K7ERQ8 282 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 HMGN4O00479 90 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 REM1O75628 298 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 GATBO75879 557 aaKnown RBP11.09□□□□□ -0.63
TP53-220ENST00000610623 KLHL18O94889 574 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 SIX6O95475 246 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 ATP1B2P14415 290 aaPredicted RBP11.09□□□□□ -0.63
TP53-220ENST00000610623 TAS2R43P59537 309 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 SNRPD1P62314 119 aaKnown RBP11.09□□□□□ -0.63
TP53-220ENST00000610623 ZNF528Q3MIS6 628 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 FAM27D1Q5T7N8 215 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 HENMT1Q5T8I9 393 aaKnown RBP11.09□□□□□ -0.63
TP53-220ENST00000610623 ZNF704Q6ZNC4 412 aaPredicted RBP11.09□□□□□ -0.63
TP53-220ENST00000610623 SLCO4C1Q6ZQN7 724 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 CCDC36Q8IYA8 594 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 KRT78Q8N1N4 520 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 SLC44A3Q8N4M1 653 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 THEM6Q8WUY1 208 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 ASZ1Q8WWH4 475 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 NR4A3Q92570 626 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 RAB8BQ92930 207 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 CCDC74AQ96AQ1 378 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 FCRL4Q96PJ5 515 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 KLHL1Q9NR64 748 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 CTPS2Q9NRF8 586 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 TAS2R3Q9NYW6 316 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 OPN4Q9UHM6 478 aa11.09□□□□□ -0.63
TP53-220ENST00000610623 GPN3Q9UHW5 284 aaPredicted RBP11.09□□□□□ -0.63
TP53-220ENST00000610623 MRTO4Q9UKD2 239 aaKnown RBP11.09□□□□□ -0.63
TP53-220ENST00000610623 RCE1Q9Y256 329 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms