RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 C6orf203Q9P0P8 240 aaPredicted RBP17.26■□□□□ 0.35
SGMS1-208ENST00000608287 SHISA8B8ZZ34 492 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 H3BNH8 94 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 LINC01387J3KSC0 135 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 HCRTR2O43614 444 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 RCBTB2O95199 551 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 AGR2O95994 175 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 IL6P05231 212 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 GSNP06396 782 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 OR12D1P0DN82 309 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 CPOXP36551 454 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 CDKN2CP42773 168 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 KHKP50053 298 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 ZNF41P51814 821 aaPredicted RBP17.25■□□□□ 0.35
SGMS1-208ENST00000608287 GPR68Q15743 365 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 ETFDHQ16134 617 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 ARHGAP11BQ3KRB8 267 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 KLHL26Q53HC5 615 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 PLXDC2Q6UX71 529 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 ZNF621Q6ZSS3 439 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 CHMP1BQ7LBR1 199 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 MTERF4Q7Z6M4 381 aaKnown RBP17.25■□□□□ 0.35
SGMS1-208ENST00000608287 HIPK1Q86Z02 1210 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 MIER2Q8N344 545 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 C9orf106Q8NAJ2 232 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 B4GALNT2Q8NHY0 566 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 CKAP2Q8WWK9 683 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 RAB8BQ92930 207 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 MED18Q9BUE0 208 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 TCF7L2Q9NQB0 619 aa17.25■□□□□ 0.35
SGMS1-208ENST00000608287 SDR39U1Q9NRG7 319 aaPredicted RBP17.25■□□□□ 0.35
SGMS1-208ENST00000608287 A0A087WZY1 265 aa17.24■□□□□ 0.35
SGMS1-208ENST00000608287 GTPBP1O00178 669 aaKnown RBP17.24■□□□□ 0.35
SGMS1-208ENST00000608287 RFXANKO14593 260 aa17.24■□□□□ 0.35
SGMS1-208ENST00000608287 SEC14L5O43304 696 aa17.24■□□□□ 0.35
SGMS1-208ENST00000608287 STX11O75558 287 aa17.24■□□□□ 0.35
SGMS1-208ENST00000608287 CRYGSP22914 178 aa17.24■□□□□ 0.35
SGMS1-208ENST00000608287 IDH3AP50213 366 aa17.24■□□□□ 0.35
SGMS1-208ENST00000608287 AQP5P55064 265 aa17.24■□□□□ 0.35
SGMS1-208ENST00000608287 ZNF117Q03924 483 aa17.24■□□□□ 0.35
SGMS1-208ENST00000608287 CHRFAM7AQ494W8 412 aa17.24■□□□□ 0.35
SGMS1-208ENST00000608287 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.24■□□□□ 0.35
SGMS1-208ENST00000608287 OLIG3Q7RTU3 272 aa17.24■□□□□ 0.35
SGMS1-208ENST00000608287 OR9I1Q8NGQ6 314 aa17.24■□□□□ 0.35
SGMS1-208ENST00000608287 MAGEB18Q96M61 343 aa17.24■□□□□ 0.35
SGMS1-208ENST00000608287 EBF4Q9BQW3 602 aa17.24■□□□□ 0.35
SGMS1-208ENST00000608287 MED17Q9NVC6 651 aa17.24■□□□□ 0.35
SGMS1-208ENST00000608287 MKLN1Q9UL63 735 aa17.24■□□□□ 0.35
SGMS1-208ENST00000608287 DTNAQ9Y4J8 743 aa17.24■□□□□ 0.35
SGMS1-208ENST00000608287 A8MXE2 369 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 DEFB108AA8MXU0 73 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 NPIPB9F8W1W9 429 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 MSTNO14793 375 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 FCMRO60667 390 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 NUDT14O95848 222 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 C1QCP02747 245 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 POLR2JP52435 117 aaKnown RBP17.23■□□□□ 0.35
SGMS1-208ENST00000608287 EEFSECP57772 596 aaKnown RBP17.23■□□□□ 0.35
SGMS1-208ENST00000608287 STX1BP61266 288 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 TMEM44Q2T9K0 475 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 PDZK1Q5T2W1 519 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 DNAJC14Q6Y2X3 702 aaPredicted RBP17.23■□□□□ 0.35
SGMS1-208ENST00000608287 ADGRE4PQ86SQ3 457 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 RNF130Q86XS8 419 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 GRAMD2AQ8IUY3 354 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 WNT2BQ93097 391 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 ZBTB8AQ96BR9 441 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 NMUR2Q9GZQ4 415 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 CLCF1Q9UBD9 225 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 STOML1Q9UBI4 398 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 CARD8Q9Y2G2 431 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 AP4B1Q9Y6B7 739 aa17.23■□□□□ 0.35
SGMS1-208ENST00000608287 H0YC42 278 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 OIP5O43482 229 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 TNFRSF21O75509 655 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 ANP32DO95626 131 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 ZNF17P17021 662 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 P2RX1P51575 399 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 SUCLG1P53597 346 aaKnown RBP17.22■□□□□ 0.35
SGMS1-208ENST00000608287 TPD52P55327 224 aaPredicted RBP17.22■□□□□ 0.35
SGMS1-208ENST00000608287 ATP5J2P56134 94 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 CLDN20P56880 219 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 PLPPR5Q32ZL2 321 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 NDUFAF6Q330K2 333 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 TIGD2Q4W5G0 525 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 CBLN3Q6UW01 205 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 P4HA3Q7Z4N8 544 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 RFWD2Q8NHY2 731 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 PNPT1Q8TCS8 783 aaKnown RBP17.22■□□□□ 0.35
SGMS1-208ENST00000608287 ROPN1LQ96C74 230 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 UCN2Q96RP3 112 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 NPAS1Q99742 590 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 KLHDC3Q9BQ90 382 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 CCDC28BQ9BUN5 200 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 AMBRA1Q9C0C7 1298 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 ZNF350Q9GZX5 532 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 RMND5AQ9H871 391 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 ZNF701Q9NV72 531 aaPredicted RBP17.22■□□□□ 0.35
SGMS1-208ENST00000608287 WDR45Q9Y484 360 aa17.22■□□□□ 0.35
SGMS1-208ENST00000608287 RAI1Q7Z5J4 1906 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms