RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 ERVK11-1P61568 191 aa4.41□□□□□ -1.7
HMGB1P51-201ENST00000605166 CYLC2Q14093 348 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P51-201ENST00000605166 C1orf220Q5T0J3 134 aa4.41□□□□□ -1.7
HMGB1P51-201ENST00000605166 CARD17Q5XLA6 110 aa4.41□□□□□ -1.7
HMGB1P51-201ENST00000605166 TRIM69Q86WT6 500 aa4.41□□□□□ -1.7
HMGB1P51-201ENST00000605166 ADAMTS16Q8TE57 1224 aa4.41□□□□□ -1.7
HMGB1P51-201ENST00000605166 ST8SIA1Q92185 356 aa4.41□□□□□ -1.7
HMGB1P51-201ENST00000605166 TM2D1Q9BX74 207 aa4.41□□□□□ -1.7
HMGB1P51-201ENST00000605166 SCRT2Q9NQ03 307 aa4.41□□□□□ -1.7
HMGB1P51-201ENST00000605166 TIGARQ9NQ88 270 aa4.41□□□□□ -1.7
HMGB1P51-201ENST00000605166 NUDT15Q9NV35 164 aa4.41□□□□□ -1.7
HMGB1P51-201ENST00000605166 PRPF19Q9UMS4 504 aaKnown RBP4.41□□□□□ -1.7
HMGB1P51-201ENST00000605166 ACOD1A6NK06 481 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 G3V3Y1 287 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 H0YIV9 168 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 AP2A1O95782 977 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 FGF4P08620 206 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 PABPC4LP0CB38 370 aaKnown RBP4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 TROVE2P10155 538 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 ETS2P15036 469 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 GCAP28676 217 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 YWHABP31946 246 aaKnown RBP4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 ETV5P41161 510 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 MAP3K8P41279 467 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 CRIP2P52943 208 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 FCHO2Q0JRZ9 810 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 KCNJ11Q14654 390 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 PPP1R3AQ16821 1122 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 KLHL38Q2WGJ6 581 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 OTUD3Q5T2D3 398 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 LIPNQ5VXI9 398 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 RUSC1-AS1Q66K80 236 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 REG3GQ6UW15 175 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 SLC22A18ASQ8N1D0 253 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 GPR137CQ8N3F9 429 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 CSNK1A1LQ8N752 337 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 CSNK1G2-AS1Q8NCQ2 148 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 C17orf47Q8NEP4 570 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 SPATA4Q8NEY3 305 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 OR4Q3Q8NH05 313 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 AGR3Q8TD06 166 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 TFB1MQ8WVM0 346 aaKnown RBP4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 MRPS31Q92665 395 aaKnown RBP4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 AGAP3Q96P47 875 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 TRIM62Q9BVG3 475 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 RAB34Q9BZG1 259 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 ZBP1Q9H171 429 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 ZNF385DQ9H6B1 395 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 EXO5Q9H790 373 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 SMYD3Q9H7B4 428 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 PNO1Q9NRX1 252 aaKnown RBP4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 IMPAD1Q9NX62 359 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 PRODH2Q9UF12 536 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 PISDQ9UG56 409 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 SLC2A6Q9UGQ3 507 aa4.4□□□□□ -1.71
HMGB1P51-201ENST00000605166 FER1L5A0AVI2 2057 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 A0A087WYN8 130 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 HAS3O00219 553 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 FCN1O00602 326 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 SLC17A2O00624 439 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 KRT14P02533 472 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 CRYGBP07316 175 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 BCL3P20749 454 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 HMGB2P26583 209 aaKnown RBP4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 CRYBB1P53674 252 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 HSPA2P54652 639 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 LIM2P55344 173 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 IRX1P78414 480 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 TGM3Q08188 693 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 CD300CQ08708 224 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 BST2Q10589 180 aaKnown RBP4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 KLHL22Q53GT1 634 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 FAM199XQ6PEV8 388 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 UTS2BQ765I0 119 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 CEP112Q8N8E3 955 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 MAGEE2Q8TD90 523 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 DNASE2BQ8WZ79 361 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 UBE2E3Q969T4 207 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 LINC00479Q96M42 142 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 ZNF670Q9BS34 389 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 TRIM51Q9BSJ1 452 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 LRRC61Q9BV99 259 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 NAT10Q9H0A0 1025 aaKnown RBP4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 HEXA-AS1Q9H8Q6 139 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 POPDC2Q9HBU9 364 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 WDR19Q8NEZ3 1342 aa4.39□□□□□ -1.71
HMGB1P51-201ENST00000605166 A0A1W2PPE3 182 aa4.38□□□□□ -1.71
HMGB1P51-201ENST00000605166 FAM220BPB1ANY3 271 aa4.38□□□□□ -1.71
HMGB1P51-201ENST00000605166 B4DXG7 233 aa4.38□□□□□ -1.71
HMGB1P51-201ENST00000605166 TCP11X1B4DZS4 312 aa4.38□□□□□ -1.71
HMGB1P51-201ENST00000605166 E9PLD3 99 aa4.38□□□□□ -1.71
HMGB1P51-201ENST00000605166 CXCL13O43927 109 aa4.38□□□□□ -1.71
HMGB1P51-201ENST00000605166 PRKYO43930 277 aa4.38□□□□□ -1.71
HMGB1P51-201ENST00000605166 ATP5LO75964 103 aa4.38□□□□□ -1.71
HMGB1P51-201ENST00000605166 ANXA8P13928 327 aa4.38□□□□□ -1.71
HMGB1P51-201ENST00000605166 ATP1B2P14415 290 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P51-201ENST00000605166 GCFC2P16383 781 aaKnown RBP4.38□□□□□ -1.71
HMGB1P51-201ENST00000605166 POLR2EP19388 210 aaKnown RBP4.38□□□□□ -1.71
HMGB1P51-201ENST00000605166 IDSP22304 550 aa4.38□□□□□ -1.71
HMGB1P51-201ENST00000605166 PTBP1P26599 531 aaKnown RBP eCLIP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms