RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 GPAT3Q53EU6 434 aa15.43■□□□□ 0.06
HERC3-214ENST00000601319 DNAJC14Q6Y2X3 702 aaPredicted RBP15.43■□□□□ 0.06
HERC3-214ENST00000601319 OLIG3Q7RTU3 272 aa15.43■□□□□ 0.06
HERC3-214ENST00000601319 LILRA2Q8N149 483 aa15.43■□□□□ 0.06
HERC3-214ENST00000601319 OR2V1Q8NHB1 315 aa15.43■□□□□ 0.06
HERC3-214ENST00000601319 FAM222BQ8WU58 562 aa15.43■□□□□ 0.06
HERC3-214ENST00000601319 ST8SIA1Q92185 356 aa15.43■□□□□ 0.06
HERC3-214ENST00000601319 EBF4Q9BQW3 602 aa15.43■□□□□ 0.06
HERC3-214ENST00000601319 SLC38A1Q9H2H9 487 aa15.43■□□□□ 0.06
HERC3-214ENST00000601319 EXOSC3Q9NQT5 275 aaKnown RBP15.43■□□□□ 0.06
HERC3-214ENST00000601319 GALNT8Q9NY28 637 aa15.43■□□□□ 0.06
HERC3-214ENST00000601319 A0A0J9YW62 118 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 A8MXE2 369 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 NID1P14543 1247 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 HOXB9P17482 250 aaPredicted RBP15.42■□□□□ 0.06
HERC3-214ENST00000601319 IL11P20809 199 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 RPS4Y1P22090 263 aaKnown RBP15.42■□□□□ 0.06
HERC3-214ENST00000601319 KIR2DL2P43627 348 aaPredicted RBP15.42■□□□□ 0.06
HERC3-214ENST00000601319 ATP4BP51164 291 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 CCR4P51679 360 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 SELENBP1Q13228 472 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 QPRTQ15274 297 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 TOMM34Q15785 309 aaPredicted RBP15.42■□□□□ 0.06
HERC3-214ENST00000601319 COX20Q5RI15 118 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 PDSS1Q5T2R2 415 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 LRRC74BQ6ZQY2 392 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 CMIPQ8IY22 773 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 ANKFN1Q8N957 763 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 FBXO27Q8NI29 283 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 VPS33AQ96AX1 596 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 STARD4Q96DR4 205 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 RBM24Q9BX46 236 aaKnown RBP15.42■□□□□ 0.06
HERC3-214ENST00000601319 TMEM185BQ9H7F4 350 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 CRIM1Q9NZV1 1036 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 MCTS1Q9ULC4 181 aaKnown RBP15.42■□□□□ 0.06
HERC3-214ENST00000601319 DSPPQ9NZW4 1301 aa15.42■□□□□ 0.06
HERC3-214ENST00000601319 AGAP5A6NIR3 686 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 TNFSF11O14788 317 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 EFNA2O43921 213 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 SS18L1O75177 396 aaPredicted RBP15.41■□□□□ 0.06
HERC3-214ENST00000601319 AQP8O94778 261 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 ANP32DO95626 131 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 CHRM4P08173 479 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 UBTFL6P0CB48 400 aaPredicted RBP15.41■□□□□ 0.06
HERC3-214ENST00000601319 CD8BP10966 210 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 PGCP20142 388 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 CPA2P48052 419 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 KRTAP10-9P60411 292 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 CHRNEQ04844 493 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 SYPL1Q16563 259 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 HBMQ6B0K9 141 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 VWA1Q6PCB0 445 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 BLOC1S3Q6QNY0 202 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 FAM214BQ7L5A3 538 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 LUZP2Q86TE4 346 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 CNEP1R1Q8N9A8 125 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 RFWD2Q8NHY2 731 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 PNPT1Q8TCS8 783 aaKnown RBP15.41■□□□□ 0.06
HERC3-214ENST00000601319 TMEM234Q8WY98 164 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 GTF2H4Q92759 462 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 ZNF524Q96C55 264 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 GMPPAQ96IJ6 420 aaPredicted RBP15.41■□□□□ 0.06
HERC3-214ENST00000601319 SIKE1Q9BRV8 207 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 THUMPD3Q9BV44 507 aaKnown RBP15.41■□□□□ 0.06
HERC3-214ENST00000601319 TPT1P8Q9HAU6 139 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 GLRX2Q9NS18 164 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.41■□□□□ 0.06
HERC3-214ENST00000601319 THUMPD1Q9NXG2 353 aaKnown RBP15.41■□□□□ 0.06
HERC3-214ENST00000601319 P2RX2Q9UBL9 471 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 CCDC168Q8NDH2 2452 aa15.41■□□□□ 0.06
HERC3-214ENST00000601319 A0A096LPI6 279 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 FAM221AA4D161 298 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 TUBAL3A6NHL2 446 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 CXCL13O43927 109 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 EDF1O60869 148 aaKnown RBP15.4■□□□□ 0.06
HERC3-214ENST00000601319 GOSR1O95249 250 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 SYNGR4O95473 234 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 CGAP01215 116 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 NR2F1P10589 423 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 SHC1P29353 583 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 SLC6A8P48029 635 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 PLAURQ03405 335 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 MAPK11Q15759 364 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 ZNF239Q16600 458 aaKnown RBP15.4■□□□□ 0.06
HERC3-214ENST00000601319 C6orf10Q5SRN2 563 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 C3orf33Q6P1S2 294 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 FUNDC1Q8IVP5 155 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 ZZZ3Q8IYH5 903 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 CPNE4Q96A23 557 aaPredicted RBP15.4■□□□□ 0.06
HERC3-214ENST00000601319 ZG16BQ96DA0 208 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 PAIP1Q9H074 479 aaKnown RBP15.4■□□□□ 0.06
HERC3-214ENST00000601319 MTHFD2LQ9H903 347 aaPredicted RBP15.4■□□□□ 0.06
HERC3-214ENST00000601319 TIGARQ9NQ88 270 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 CALML5Q9NZT1 146 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 MPDZO75970 2070 aa15.4■□□□□ 0.06
HERC3-214ENST00000601319 CTAG2O75638 210 aa15.39■□□□□ 0.05
HERC3-214ENST00000601319 DBIP07108 87 aaKnown RBP15.39■□□□□ 0.05
HERC3-214ENST00000601319 PABPC4LP0CB38 370 aaKnown RBP15.39■□□□□ 0.05
HERC3-214ENST00000601319 BMP2P12643 396 aa15.39■□□□□ 0.05
HERC3-214ENST00000601319 SFTPDP35247 375 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms