RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 KIR2DL2P43627 348 aaPredicted RBP7.89□□□□□ -1.15
SSBP4-208ENST00000600628 ASCL1P50553 236 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 GPR68Q15743 365 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 ADRM1Q16186 407 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 NDUFAF6Q330K2 333 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 ATAD3BQ5T9A4 648 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 RAET1LQ5VY80 246 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 SLC2A7Q6PXP3 512 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 PLXDC2Q6UX71 529 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 ESPNLQ6ZVH7 1005 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 EIF3MQ7L2H7 374 aaKnown RBP7.89□□□□□ -1.15
SSBP4-208ENST00000600628 C16orf62Q7Z3J2 963 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 RETREG3Q86VR2 466 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 OR5M1Q8NGP8 315 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 DYDC1Q8WWB3 177 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 ST8SIA1Q92185 356 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 STARD4Q96DR4 205 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 SH3YL1Q96HL8 342 aaPredicted RBP7.89□□□□□ -1.15
SSBP4-208ENST00000600628 RNF145Q96MT1 663 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 TRIB1Q96RU8 372 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 CCDC106Q9BWC9 280 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 SFXN3Q9BWM7 321 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 ACBD3Q9H3P7 528 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 IKZF5Q9H5V7 419 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 COQ10BQ9H8M1 238 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 ACER3Q9NUN7 267 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 THUMPD1Q9NXG2 353 aaKnown RBP7.89□□□□□ -1.15
SSBP4-208ENST00000600628 DNAJB12Q9NXW2 375 aaKnown RBP7.89□□□□□ -1.15
SSBP4-208ENST00000600628 VAPAQ9P0L0 249 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 VDAC3Q9Y277 283 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 SLC35A3Q9Y2D2 325 aa7.89□□□□□ -1.15
SSBP4-208ENST00000600628 HIVEP1P15822 2718 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 UQCRHLA0A096LP55 91 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 A0A1W2PNV4 684 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 CDHR4A6H8M9 788 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 CLDN24A6NM45 220 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 A8MXE2 369 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 H3BNH8 94 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 CLIC1O00299 241 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 DVL2O14641 736 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 AQP8O94778 261 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 CSTAP01040 98 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 ARAFP10398 606 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 HPGDP15428 266 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 POU3F2P20265 443 aaPredicted RBP7.88□□□□□ -1.15
SSBP4-208ENST00000600628 EEFSECP57772 596 aaKnown RBP7.88□□□□□ -1.15
SSBP4-208ENST00000600628 EEF1A1P68104 462 aaKnown RBP7.88□□□□□ -1.15
SSBP4-208ENST00000600628 SRYQ05066 204 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 FOXF1Q12946 379 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 CBFBQ13951 182 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 RNF220Q5VTB9 566 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 EEF1A1P5Q5VTE0 462 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 MEIOBQ8N635 442 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 ARFGAP2Q8N6H7 521 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 FBXO27Q8NI29 283 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 FNDC9Q8TBE3 224 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 FIG4Q92562 907 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 CNOT9Q92600 299 aaKnown RBP7.88□□□□□ -1.15
SSBP4-208ENST00000600628 SLC35B4Q969S0 331 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 ZNF845Q96IR2 970 aaPredicted RBP7.88□□□□□ -1.15
SSBP4-208ENST00000600628 CPPED1Q9BRF8 314 aaPredicted RBP7.88□□□□□ -1.15
SSBP4-208ENST00000600628 ADAM19Q9H013 955 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 QRSL1Q9H0R6 528 aaKnown RBP7.88□□□□□ -1.15
SSBP4-208ENST00000600628 RABEP2Q9H5N1 569 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 TMEM38AQ9H6F2 299 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 NPHS2Q9NP85 383 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 A4GALTQ9NPC4 353 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 PAQR5Q9NXK6 330 aaPredicted RBP7.88□□□□□ -1.15
SSBP4-208ENST00000600628 CCDC167Q9P0B6 97 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 KCNN3Q9UGI6 736 aa7.88□□□□□ -1.15
SSBP4-208ENST00000600628 FOXD3Q9UJU5 478 aaPredicted RBP7.88□□□□□ -1.15
SSBP4-208ENST00000600628 ING1Q9UK53 422 aaPredicted RBP7.88□□□□□ -1.15
SSBP4-208ENST00000600628 A0A0G2JPF8 293 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 SLC22A20A6NK97 555 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 HNRNPCL2B2RXH8 293 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 HNRNPCL3B7ZW38 293 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 H3BML4 177 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 FXYD1O00168 92 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 FBP2O00757 339 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 MSTNO14793 375 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 HNRNPCL1O60812 293 aaKnown RBP7.87□□□□□ -1.15
SSBP4-208ENST00000600628 THBS1P07996 1170 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 NUDT7P0C024 238 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 HNRNPCL4P0DMR1 293 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 TMIGD3P0DMS9 266 aaPredicted RBP7.87□□□□□ -1.15
SSBP4-208ENST00000600628 CD8BP10966 210 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 ETS2P15036 469 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 BMP5P22003 454 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 TCEA1P23193 301 aaKnown RBP7.87□□□□□ -1.15
SSBP4-208ENST00000600628 MDH1P40925 334 aaKnown RBP7.87□□□□□ -1.15
SSBP4-208ENST00000600628 ACAA2P42765 397 aaKnown RBP7.87□□□□□ -1.15
SSBP4-208ENST00000600628 SLC6A8P48029 635 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 ANXA11P50995 505 aaKnown RBP7.87□□□□□ -1.15
SSBP4-208ENST00000600628 GZMMP51124 257 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 ZNF41P51814 821 aaPredicted RBP7.87□□□□□ -1.15
SSBP4-208ENST00000600628 PCBP3P57721 371 aaKnown RBP7.87□□□□□ -1.15
SSBP4-208ENST00000600628 SESN3P58005 492 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 DSTNP60981 165 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 STX1BP61266 288 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 SORDQ00796 357 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms