RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 NRF1Q16656 503 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 SLC25A53Q5H9E4 307 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 KANK2Q63ZY3 851 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 DTX2Q86UW9 622 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 P2RY8Q86VZ1 359 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 NATD1Q8N6N6 113 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 OR56A1Q8NGH5 318 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 ADAMTS15Q8TE58 950 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 PSD2Q9BQI7 771 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 TUBB1Q9H4B7 451 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 FAF1Q9UNN5 650 aaPredicted RBP18.76■□□□□ 0.59
PNKP-212ENST00000599454 FIS1Q9Y3D6 152 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 DNAJC15Q9Y5T4 150 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 SCAMP2O15127 329 aaKnown RBP18.75■□□□□ 0.59
PNKP-212ENST00000599454 OIP5O43482 229 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 LINC00032P0C843 101 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 BCKDHAP12694 445 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 EFNA1P20827 205 aaPredicted RBP18.75■□□□□ 0.59
PNKP-212ENST00000599454 ENPP1P22413 925 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 MAPK1P28482 360 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 PPA1Q15181 289 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 GALNTL6Q49A17 601 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 DCST2Q5T1A1 773 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 ATP6V1C2Q8NEY4 427 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 TOR1AIP2Q8NFQ8 470 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 PSMA8Q8TAA3 256 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 MUCL1Q96DR8 90 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 RADILQ96JH8 1075 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 CXorf36Q9H7Y0 433 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 PPCSQ9HAB8 311 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 YAE1D1Q9NRH1 226 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 CISD1Q9NZ45 108 aaKnown RBP18.75■□□□□ 0.59
PNKP-212ENST00000599454 DTNAQ9Y4J8 743 aa18.75■□□□□ 0.59
PNKP-212ENST00000599454 RNF212BA8MTL3 300 aa18.74■□□□□ 0.59
PNKP-212ENST00000599454 ZNF724A8MTY0 619 aa18.74■□□□□ 0.59
PNKP-212ENST00000599454 ETV2O00321 342 aaPredicted RBP18.74■□□□□ 0.59
PNKP-212ENST00000599454 COPEO14579 308 aa18.74■□□□□ 0.59
PNKP-212ENST00000599454 EIF4E2O60573 245 aaKnown RBP18.74■□□□□ 0.59
PNKP-212ENST00000599454 FAM153BP0C7A2 387 aa18.74■□□□□ 0.59
PNKP-212ENST00000599454 CCT3P49368 545 aaKnown RBP18.74■□□□□ 0.59
PNKP-212ENST00000599454 RASGEF1BQ0VAM2 473 aa18.74■□□□□ 0.59
PNKP-212ENST00000599454 TOMM34Q15785 309 aaPredicted RBP18.74■□□□□ 0.59
PNKP-212ENST00000599454 FAM153CQ494X1 144 aa18.74■□□□□ 0.59
PNKP-212ENST00000599454 TIMM23BQ5SRD1 257 aa18.74■□□□□ 0.59
PNKP-212ENST00000599454 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.74■□□□□ 0.59
PNKP-212ENST00000599454 ATG4DQ86TL0 474 aaPredicted RBP18.74■□□□□ 0.59
PNKP-212ENST00000599454 OR5W2Q8NH69 310 aa18.74■□□□□ 0.59
PNKP-212ENST00000599454 OR5P2Q8WZ92 322 aa18.74■□□□□ 0.59
PNKP-212ENST00000599454 MOAP1Q96BY2 351 aa18.74■□□□□ 0.59
PNKP-212ENST00000599454 ATAD3AQ9NVI7 634 aa18.74■□□□□ 0.59
PNKP-212ENST00000599454 ING1Q9UK53 422 aaPredicted RBP18.74■□□□□ 0.59
PNKP-212ENST00000599454 NPIPA5A0A0B4J1W7 369 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 NPIPA7E9PJI5 369 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 NPIPB9F8W1W9 429 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 ZNF264O43296 627 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 CYTIPO60759 359 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 TRIM13O60858 407 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 ADAM11O75078 769 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 LYZL6O75951 148 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 CD8AP01732 235 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 FGF4P08620 206 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 NPIPA8P0DM63 369 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 TP53BP2Q13625 1128 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 CBFBQ13951 182 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 STK11Q15831 433 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 LSM12Q3MHD2 195 aaKnown RBP18.73■□□□□ 0.59
PNKP-212ENST00000599454 AGAP6Q5VW22 663 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 C3orf33Q6P1S2 294 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 C10orf107Q8IVU9 208 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 DDIASQ8IXT1 998 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 SFXN5Q8TD22 340 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 PPP3R2Q96LZ3 170 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 RHNO1Q9BSD3 238 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 GATA5Q9BWX5 397 aaPredicted RBP18.73■□□□□ 0.59
PNKP-212ENST00000599454 GPATCH2Q9NW75 528 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 PRSS50Q9UI38 385 aa18.73■□□□□ 0.59
PNKP-212ENST00000599454 IGHV3-15A0A0B4J1V0 119 aa18.72■□□□□ 0.59
PNKP-212ENST00000599454 GOLGA8QA0A0J9YX86 632 aa18.72■□□□□ 0.59
PNKP-212ENST00000599454 A0A1W2PNR3 127 aa18.72■□□□□ 0.59
PNKP-212ENST00000599454 GOLGA8OA6NCC3 632 aa18.72■□□□□ 0.59
PNKP-212ENST00000599454 A8MV72 311 aaPredicted RBP18.72■□□□□ 0.59
PNKP-212ENST00000599454 SHISA9B4DS77 424 aa18.72■□□□□ 0.59
PNKP-212ENST00000599454 GOLGA8NF8WBI6 632 aa18.72■□□□□ 0.59
PNKP-212ENST00000599454 LAMP1P11279 417 aa18.72■□□□□ 0.59
PNKP-212ENST00000599454 UBL4AP11441 157 aa18.72■□□□□ 0.59
PNKP-212ENST00000599454 COX5AP20674 150 aa18.72■□□□□ 0.59
PNKP-212ENST00000599454 CDH11P55287 796 aa18.72■□□□□ 0.59
PNKP-212ENST00000599454 QPRTQ15274 297 aa18.72■□□□□ 0.59
PNKP-212ENST00000599454 SPDYE7PQ495Y7 208 aa18.72■□□□□ 0.59
PNKP-212ENST00000599454 ARL13AQ5H913 290 aaPredicted RBP18.72■□□□□ 0.59
PNKP-212ENST00000599454 TMCO5AQ8N6Q1 288 aa18.72■□□□□ 0.59
PNKP-212ENST00000599454 ZNF614Q8N883 585 aa18.72■□□□□ 0.59
PNKP-212ENST00000599454 OR7A2PQ8NGA2 310 aa18.72■□□□□ 0.59
PNKP-212ENST00000599454 TWIST2Q8WVJ9 160 aa18.72■□□□□ 0.59
PNKP-212ENST00000599454 ADAD1Q96M93 576 aaKnown RBP18.72■□□□□ 0.59
PNKP-212ENST00000599454 ABCD4O14678 606 aa18.71■□□□□ 0.59
PNKP-212ENST00000599454 SMAD9O15198 467 aaKnown RBP18.71■□□□□ 0.59
PNKP-212ENST00000599454 RAMP1O60894 148 aa18.71■□□□□ 0.59
PNKP-212ENST00000599454 LYPLA1O75608 230 aaPredicted RBP18.71■□□□□ 0.59
PNKP-212ENST00000599454 PGM3O95394 542 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms