RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 PTGR1Q14914 329 aa13.05□□□□□ -0.32
IRF3-223ENST00000599223 UGT3A2Q3SY77 523 aa13.05□□□□□ -0.32
IRF3-223ENST00000599223 STK32CQ86UX6 486 aa13.05□□□□□ -0.32
IRF3-223ENST00000599223 MISPQ8IVT2 679 aa13.05□□□□□ -0.32
IRF3-223ENST00000599223 TUSC5Q8IXB3 177 aa13.05□□□□□ -0.32
IRF3-223ENST00000599223 ANKS4BQ8N8V4 417 aa13.05□□□□□ -0.32
IRF3-223ENST00000599223 TWIST2Q8WVJ9 160 aa13.05□□□□□ -0.32
IRF3-223ENST00000599223 ZNF75CPQ92670 426 aaPredicted RBP13.05□□□□□ -0.32
IRF3-223ENST00000599223 MECRQ9BV79 373 aa13.05□□□□□ -0.32
IRF3-223ENST00000599223 OR10A4Q9H209 315 aa13.05□□□□□ -0.32
IRF3-223ENST00000599223 CXorf56Q9H5V9 222 aa13.05□□□□□ -0.32
IRF3-223ENST00000599223 CXorf36Q9H7Y0 433 aa13.05□□□□□ -0.32
IRF3-223ENST00000599223 DUSP22Q9NRW4 184 aa13.05□□□□□ -0.32
IRF3-223ENST00000599223 GPATCH2Q9NW75 528 aa13.05□□□□□ -0.32
IRF3-223ENST00000599223 ATP6V1HQ9UI12 483 aa13.05□□□□□ -0.32
IRF3-223ENST00000599223 ING1Q9UK53 422 aaPredicted RBP13.05□□□□□ -0.32
IRF3-223ENST00000599223 LAMP3Q9UQV4 416 aa13.05□□□□□ -0.32
IRF3-223ENST00000599223 CARD8Q9Y2G2 431 aa13.05□□□□□ -0.32
IRF3-223ENST00000599223 STAB1Q9NY15 2570 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 IGHV3-15A0A0B4J1V0 119 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 CENPVL1A0A0U1RR11 272 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 NPIPB9F8W1W9 429 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 BPGMP07738 259 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 DHRS4L1P0CG22 281 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 HPGDP15428 266 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 ENPP1P22413 925 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 LCN1P31025 176 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 ETV4P43268 484 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 CARD18P57730 90 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 MLC1Q15049 377 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 TAB1Q15750 504 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 KLHL26Q53HC5 615 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 XKR7Q5GH72 579 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 CDC73Q6P1J9 531 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 ZCCHC12Q6PEW1 402 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 DDIASQ8IXT1 998 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 LRRC34Q8IZ02 419 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 KBTBD8Q8NFY9 601 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 FBXO27Q8NI29 283 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 PHOSPHO1Q8TCT1 267 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 AGR3Q8TD06 166 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 STACQ99469 402 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 C1orf50Q9BV19 199 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 PIGUQ9H490 435 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 TMED5Q9Y3A6 229 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 RNF115Q9Y4L5 304 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 SNX8Q9Y5X2 465 aa13.04□□□□□ -0.32
IRF3-223ENST00000599223 MXRA5Q9NR99 2828 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 ZNF814B7Z6K7 855 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 OVOL3O00110 214 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 KLF11O14901 512 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 CLOCKO15516 846 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 DANCRP0C864 163 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 TROVE2P10155 538 aaKnown RBP eCLIP13.03□□□□□ -0.321e-6■□□□□ 8.4
IRF3-223ENST00000599223 PRKCAP17252 672 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 HPCAL1P37235 193 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 EIF1P41567 113 aaKnown RBP13.03□□□□□ -0.32
IRF3-223ENST00000599223 ASMTP46597 345 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 RPS4XP62701 263 aaKnown RBP13.03□□□□□ -0.32
IRF3-223ENST00000599223 PPP2R2BQ00005 443 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 TP53BP2Q13625 1128 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 DCST2Q5T1A1 773 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 NCMAPQ5T1S8 102 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 FCRLAQ7L513 359 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 KRTCAP2Q8N6L1 136 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 ATP6V1C2Q8NEY4 427 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 STEAP2Q8NFT2 490 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 PSMA8Q8TAA3 256 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 ZFP90Q8TF47 636 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 CPNE4Q96A23 557 aaPredicted RBP13.03□□□□□ -0.32
IRF3-223ENST00000599223 MTERF3Q96E29 417 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 C3orf30Q96M34 536 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 ZNF317Q96PQ6 595 aaPredicted RBP13.03□□□□□ -0.32
IRF3-223ENST00000599223 TRMOQ9BU70 441 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 SERHL2Q9H4I8 314 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 RABEP2Q9H5N1 569 aa13.03□□□□□ -0.32
IRF3-223ENST00000599223 MAGED1Q9Y5V3 778 aaPredicted RBP13.03□□□□□ -0.32
IRF3-223ENST00000599223 A0A1W2PNR3 127 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 RNF223E7ERA6 249 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 ZNF195O14628 629 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 TRIM13O60858 407 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 H6PDO95479 791 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 NUDT14O95848 222 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 C6orf47O95873 294 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 BGNP21810 368 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 DRD4P21917 467 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 IL32P24001 234 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 CDKN1AP38936 164 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 SUMO3P55854 103 aaPredicted RBP13.02□□□□□ -0.33
IRF3-223ENST00000599223 RPS26P62854 115 aaKnown RBP13.02□□□□□ -0.33
IRF3-223ENST00000599223 BSPH1Q075Z2 132 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 STX3Q13277 289 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 VEZF1Q14119 521 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 RNPS1Q15287 305 aaKnown RBP13.02□□□□□ -0.33
IRF3-223ENST00000599223 CHI3L2Q15782 390 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 TMEM176BQ3YBM2 270 aaPredicted RBP13.02□□□□□ -0.33
IRF3-223ENST00000599223 ARL13AQ5H913 290 aaPredicted RBP13.02□□□□□ -0.33
IRF3-223ENST00000599223 TMEM201Q5SNT2 666 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 PDSS1Q5T2R2 415 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 SFRP5Q5T4F7 317 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms