RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 ZNF655Q8N720 491 aaPredicted RBP14.19□□□□□ -0.14
UPF1-204ENST00000596842 ARIH2OSQ8N7S6 290 aa14.19□□□□□ -0.14
UPF1-204ENST00000596842 POGLUT1Q8NBL1 392 aa14.19□□□□□ -0.14
UPF1-204ENST00000596842 KIAA1143Q96AT1 154 aaPredicted RBP14.19□□□□□ -0.14
UPF1-204ENST00000596842 RADILQ96JH8 1075 aa14.19□□□□□ -0.14
UPF1-204ENST00000596842 SLC6A20Q9NP91 592 aa14.19□□□□□ -0.14
UPF1-204ENST00000596842 PRDM7Q9NQW5 492 aa14.19□□□□□ -0.14
UPF1-204ENST00000596842 NLGN3Q9NZ94 848 aa14.19□□□□□ -0.14
UPF1-204ENST00000596842 ASB4Q9Y574 426 aa14.19□□□□□ -0.14
UPF1-204ENST00000596842 FAM86C2PA6NEL3 165 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 UNC119BA6NIH7 251 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 FZD7O75084 574 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 MAKP20794 623 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 AK4P27144 223 aaPredicted RBP14.18□□□□□ -0.14
UPF1-204ENST00000596842 CLDN12P56749 244 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 GPR85P60893 370 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 DUSP5Q16690 384 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 SLC48A1Q6P1K1 146 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 CDK20Q8IZL9 346 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 FAM98AQ8NCA5 519 aaKnown RBP14.18□□□□□ -0.14
UPF1-204ENST00000596842 OR2L5Q8NG80 312 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 LCN9Q8WX39 176 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 LINC00615Q96LM1 132 aaPredicted RBP14.18□□□□□ -0.14
UPF1-204ENST00000596842 SEC22CQ9BRL7 303 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 GPR174Q9BXC1 333 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 ZNF443Q9Y2A4 671 aaPredicted RBP14.18□□□□□ -0.14
UPF1-204ENST00000596842 SLC19A2O60779 497 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 CCL5P13501 91 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 PSMB10P40306 273 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 STAT5AP42229 794 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 LGALS3BPQ08380 585 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 SCRN3Q0VDG4 424 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 CRMP1Q14194 572 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 EXOSC7Q15024 291 aaKnown RBP14.18□□□□□ -0.14
UPF1-204ENST00000596842 MAPK14Q16539 360 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 ACSM3Q53FZ2 586 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 VASNQ6EMK4 673 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 KIAA1211LQ6NV74 962 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 CD300LDQ6UXZ3 194 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 MRPL43Q8N983 215 aaKnown RBP14.18□□□□□ -0.14
UPF1-204ENST00000596842 HYLS1Q96M11 299 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 ACTRT3Q9BYD9 372 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 BCL2L10Q9HD36 194 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 SIDT1Q9NXL6 827 aaKnown RBP14.18□□□□□ -0.14
UPF1-204ENST00000596842 LIPT1Q9Y234 373 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 TMEM5Q9Y2B1 443 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 CA5BQ9Y2D0 317 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 PTHLHP12272 177 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 F3P13726 295 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 ZNF836Q6ZNA1 936 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 LINGO2Q7L985 606 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 SIAH3Q8IW03 269 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 RFLNBQ8N5W9 214 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 OR4K13Q8NH42 304 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 OR4C6Q8NH72 309 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 PTCHD1Q96NR3 888 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 DPAGT1Q9H3H5 408 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 FN3KQ9H479 309 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 IL20Q9NYY1 176 aa14.18□□□□□ -0.14
UPF1-204ENST00000596842 HRGP04196 525 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 GLAP06280 429 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 FPR3P25089 353 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 ERVK-21P61565 698 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 IRF4Q15306 451 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 DUSP6Q16828 381 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 HYAL4Q2M3T9 481 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 ZNF613Q6PF04 617 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 MBOAT2Q6ZWT7 520 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 COX18Q8N8Q8 333 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 DUSP18Q8NEJ0 188 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 GHSRQ92847 366 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 GDF15Q99988 308 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 SLC25A18Q9H1K4 315 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 FLVCR2Q9UPI3 526 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 CDHR4A6H8M9 788 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 ANKRD61A6NGH8 418 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 GMFGO60234 142 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 MT-ND5P03915 603 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 FRKP42685 505 aaPredicted RBP14.17□□□□□ -0.14
UPF1-204ENST00000596842 EFNB1P98172 346 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 ARHGAP19Q14CB8 494 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 ODF4Q2M2E3 257 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 MRPL2Q5T653 305 aaKnown RBP14.17□□□□□ -0.14
UPF1-204ENST00000596842 C17orf107Q6ZR85 190 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 SDR9C7Q8NEX9 313 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 OR5M3Q8NGP4 307 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 OR6K6Q8NGW6 343 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 OR5J2Q8NH18 312 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 CHFRQ96EP1 664 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 EMC3Q9P0I2 261 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 NUP50Q9UKX7 468 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 A0A1B0GVT2 93 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 LRRN3E7EW58 273 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 CHP2O43745 196 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 ICAM2P13598 275 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 HBMQ6B0K9 141 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 MEPCEQ7L2J0 689 aaKnown RBP14.17□□□□□ -0.14
UPF1-204ENST00000596842 SLC44A3Q8N4M1 653 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 OR2L3Q8NG85 312 aa14.17□□□□□ -0.14
UPF1-204ENST00000596842 OR11H7Q8NGC8 314 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms