RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 SELENBP1Q13228 472 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 FGFBP1Q14512 234 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 QPRTQ15274 297 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 ANXA8L1Q5VT79 327 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 FRRS1Q6ZNA5 592 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 C16orf62Q7Z3J2 963 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 HMGN2P46Q86SG4 172 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 OR5W2Q8NH69 310 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 ZFP90Q8TF47 636 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 ROBO4Q8WZ75 1007 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 HS3ST6Q96QI5 342 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 SLC35A5Q9BS91 424 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 INPP5KQ9BT40 448 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 PRRG4Q9BZD6 226 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 THAP1Q9NVV9 213 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 ELOVL5Q9NYP7 299 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 STOML1Q9UBI4 398 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 FREM1Q5H8C1 2179 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 GTPBP1O00178 669 aaKnown RBP11.65□□□□□ -0.54
LIG1-212ENST00000596549 HMGN4O00479 90 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 ZNF195O14628 629 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 EIF4E2O60573 245 aaKnown RBP11.65□□□□□ -0.54
LIG1-212ENST00000596549 SYNGR4O95473 234 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 H6PDO95479 791 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 PLGP00747 810 aaPredicted RBP11.65□□□□□ -0.54
LIG1-212ENST00000596549 UBTFL6P0CB48 400 aaPredicted RBP11.65□□□□□ -0.54
LIG1-212ENST00000596549 KLK2P20151 261 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 CRYGSP22914 178 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 DNASE1P24855 282 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 S100A3P33764 101 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 PGM1P36871 562 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 KHKP50053 298 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 CBFBQ13951 182 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 EXOC3L2Q2M3D2 409 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 SLC9B1Q4ZJI4 515 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 TOR1AIP2Q8NFQ8 470 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 RAB3IL1Q8TBN0 382 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 OSTF1Q92882 214 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 CPNE4Q96A23 557 aaPredicted RBP11.65□□□□□ -0.54
LIG1-212ENST00000596549 ROPN1LQ96C74 230 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 MBD6Q96DN6 1003 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 MRGPRX4Q96LA9 322 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 ALPK1Q96QP1 1244 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 SAP130Q9H0E3 1048 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 QRSL1Q9H0R6 528 aaKnown RBP11.65□□□□□ -0.54
LIG1-212ENST00000596549 PLSCR4Q9NRQ2 329 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 SLC6A13Q9NSD5 602 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 EXD2Q9NVH0 621 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 NDRG3Q9UGV2 375 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 BTNL2Q9UIR0 455 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 PCDHGB4Q9UN71 923 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 EMC9Q9Y3B6 208 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 WDR45Q9Y484 360 aa11.65□□□□□ -0.54
LIG1-212ENST00000596549 IGHV3-15A0A0B4J1V0 119 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 A0A1W2PNR3 127 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 CLDN24A6NM45 220 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 ADAM11O75078 769 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 CSTAP01040 98 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 PGRP06401 933 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 THBDP07204 575 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 GUSBP08236 651 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 CD53P19397 219 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 KCNJ5P48544 419 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 CTBP2P56545 445 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 ANKRD34AQ69YU3 496 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 C3orf33Q6P1S2 294 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 DNAJC14Q6Y2X3 702 aaPredicted RBP11.64□□□□□ -0.55
LIG1-212ENST00000596549 STAC2Q6ZMT1 411 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 SPATA19Q7Z5L4 167 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 RNF130Q86XS8 419 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 KRTAP1-3Q8IUG1 177 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 ZNF619Q8N2I2 560 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 ATP6V1C2Q8NEY4 427 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 XAGE5Q8WWM1 108 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 ZG16BQ96DA0 208 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 PANX1Q96RD7 426 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 MED18Q9BUE0 208 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 THUMPD3Q9BV44 507 aaKnown RBP11.64□□□□□ -0.55
LIG1-212ENST00000596549 LAT2Q9GZY6 243 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 C12orf49Q9H741 205 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 KLHL13Q9P2N7 655 aa11.64□□□□□ -0.55
LIG1-212ENST00000596549 ING1Q9UK53 422 aaPredicted RBP11.64□□□□□ -0.55
LIG1-212ENST00000596549 ABCA4P78363 2273 aa11.63□□□□□ -0.55
LIG1-212ENST00000596549 CCDC154A6NI56 674 aa11.63□□□□□ -0.55
LIG1-212ENST00000596549 TRPC5OSA6NMA1 111 aa11.63□□□□□ -0.55
LIG1-212ENST00000596549 C16orf97H3BN30 126 aa11.63□□□□□ -0.55
LIG1-212ENST00000596549 SMAD9O15198 467 aaKnown RBP11.63□□□□□ -0.55
LIG1-212ENST00000596549 ERLIN1O75477 346 aa11.63□□□□□ -0.55
LIG1-212ENST00000596549 CYP7B1O75881 506 aa11.63□□□□□ -0.55
LIG1-212ENST00000596549 AGR2O95994 175 aa11.63□□□□□ -0.55
LIG1-212ENST00000596549 GSNP06396 782 aa11.63□□□□□ -0.55
LIG1-212ENST00000596549 CHRM4P08173 479 aa11.63□□□□□ -0.55
LIG1-212ENST00000596549 CHI3L1P36222 383 aaPredicted RBP11.63□□□□□ -0.55
LIG1-212ENST00000596549 MVDP53602 400 aa11.63□□□□□ -0.55
LIG1-212ENST00000596549 CARD18P57730 90 aa11.63□□□□□ -0.55
LIG1-212ENST00000596549 SESN3P58005 492 aa11.63□□□□□ -0.55
LIG1-212ENST00000596549 CHRNEQ04844 493 aa11.63□□□□□ -0.55
LIG1-212ENST00000596549 KEAP1Q14145 624 aa11.63□□□□□ -0.55
LIG1-212ENST00000596549 MAPK11Q15759 364 aa11.63□□□□□ -0.55
LIG1-212ENST00000596549 SYPL1Q16563 259 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms