RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 GALNT10Q86SR1 603 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 SLC22A16Q86VW1 577 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 ARMC8Q8IUR7 673 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 SAMD14Q8IZD0 417 aaPredicted RBP11.69□□□□□ -0.54
SCAF1-202ENST00000595242 PSD4Q8NDX1 1056 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 OR2M7Q8NG81 312 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 SARAFQ96BY9 339 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 CNRIP1Q96F85 164 aaPredicted RBP11.69□□□□□ -0.54
SCAF1-202ENST00000595242 ZNF681Q96N22 645 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 OR1F2PQ96R84 312 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 SECISBP2Q96T21 854 aaKnown RBP11.69□□□□□ -0.54
SCAF1-202ENST00000595242 MBOAT4Q96T53 435 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 EPYCQ99645 322 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 TUBA8Q9NY65 449 aaPredicted RBP11.69□□□□□ -0.54
SCAF1-202ENST00000595242 NDUFA13Q9P0J0 144 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 TMEFF2Q9UIK5 374 aaPredicted RBP11.69□□□□□ -0.54
SCAF1-202ENST00000595242 MYRFQ9Y2G1 1151 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 SMIM31A0A1B0GVY4 71 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 E9PQ18 207 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 SLC16A6O15403 523 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 E2F6O75461 281 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 GLSO94925 669 aaPredicted RBP11.68□□□□□ -0.54
SCAF1-202ENST00000595242 TFAP2AP05549 437 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 GNAO1P09471 354 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 TFPTP0C1Z6 253 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 ZNF888P0CJ79 500 aaPredicted RBP11.68□□□□□ -0.54
SCAF1-202ENST00000595242 NR2F6P10588 404 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 GABRA1P14867 456 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 CSNK2A2P19784 350 aaPredicted RBP11.68□□□□□ -0.54
SCAF1-202ENST00000595242 ZNF10P21506 573 aaPredicted RBP11.68□□□□□ -0.54
SCAF1-202ENST00000595242 MAGEA5P43359 124 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 RPL5P46777 297 aaKnown RBP11.68□□□□□ -0.54
SCAF1-202ENST00000595242 CCT3P49368 545 aaKnown RBP11.68□□□□□ -0.54
SCAF1-202ENST00000595242 ANXA11P50995 505 aaKnown RBP11.68□□□□□ -0.54
SCAF1-202ENST00000595242 RPS6KA3P51812 740 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 RAD23AP54725 363 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 RAB8AP61006 207 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 IL18R1Q13478 541 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 MAPK11Q15759 364 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 LIN52Q52LA3 116 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 PRAMEF8Q5VWM4 474 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 PRAMEF7Q5VXH5 474 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 KDM4DQ6B0I6 523 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 KIF18BQ86Y91 864 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 FAM109AQ8N4B1 249 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 KCT2Q8NC54 265 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 NAXEQ8NCW5 288 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 OR56A1Q8NGH5 318 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 ZCCHC10Q8TBK6 192 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 CYGBQ8WWM9 190 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 GEMIN6Q8WXD5 167 aaKnown RBP11.68□□□□□ -0.54
SCAF1-202ENST00000595242 LZICQ8WZA0 190 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 UCN3Q969E3 161 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 PIGTQ969N2 578 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 FBXL20Q96IG2 436 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 SLC35G5Q96KT7 338 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 ZNF347Q96SE7 839 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 PIP5K1AQ99755 562 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 MAPKAP1Q9BPZ7 522 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 PSD2Q9BQI7 771 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 SERHL2Q9H4I8 314 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 CLK4Q9HAZ1 481 aaKnown RBP11.68□□□□□ -0.54
SCAF1-202ENST00000595242 LYRM4Q9HD34 91 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 GIMAP4Q9NUV9 329 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 MS4A12Q9NXJ0 267 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 NTMQ9P121 344 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 BAG5Q9UL15 447 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 NAALAD2Q9Y3Q0 740 aa11.68□□□□□ -0.54
SCAF1-202ENST00000595242 MAGED1Q9Y5V3 778 aaPredicted RBP11.68□□□□□ -0.54
SCAF1-202ENST00000595242 CR1P17927 2039 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 A0A0G2JMM0 328 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 A0A1W2PPB8 328 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 A0A1W2PRS3 328 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 SAGE2PA6NJ88 616 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 A8MVJ9 347 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 KIR3DP1A8MWS1 328 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 hCG_2039718K7EN88 272 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 M0QX08 132 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 HMGN4O00479 90 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 PGRMC2O15173 223 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 ADAMDEC1O15204 470 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 SUSD5O60279 629 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 CLPTM1O96005 669 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 IFNA2P01563 188 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 CELA3AP09093 270 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 ITGA2P17301 1181 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 CD247P20963 164 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 BUD31P41223 144 aaPredicted RBP11.67□□□□□ -0.54
SCAF1-202ENST00000595242 MAN2A2P49641 1150 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 KHKP50053 298 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 NCBP2P52298 156 aaKnown RBP eCLIP11.67□□□□□ -0.54
SCAF1-202ENST00000595242 ARHGDIAP52565 204 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 BTN3A2P78410 334 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 SPDYE7PQ495Y7 208 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 FOXB2Q5VYV0 432 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 C18orf63Q68DL7 685 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 FAHD1Q6P587 224 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 BHLHB9Q6PI77 547 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 SEM1Q6ZVN7 128 aa11.67□□□□□ -0.54
SCAF1-202ENST00000595242 ABHD13Q7L211 337 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms