RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 ATP6V1C2Q8NEY4 427 aa21.24■□□□□ 0.99
LSM4-202ENST00000593564 OR5W2Q8NH69 310 aa21.24■□□□□ 0.99
LSM4-202ENST00000593564 AGR3Q8TD06 166 aa21.24■□□□□ 0.99
LSM4-202ENST00000593564 ZNF524Q96C55 264 aa21.24■□□□□ 0.99
LSM4-202ENST00000593564 C3orf30Q96M34 536 aa21.24■□□□□ 0.99
LSM4-202ENST00000593564 C1orf50Q9BV19 199 aa21.24■□□□□ 0.99
LSM4-202ENST00000593564 MECRQ9BV79 373 aa21.24■□□□□ 0.99
LSM4-202ENST00000593564 POTEKPQ9BYX7 375 aa21.24■□□□□ 0.99
LSM4-202ENST00000593564 ANKZF1Q9H8Y5 726 aa21.24■□□□□ 0.99
LSM4-202ENST00000593564 BCO1Q9HAY6 547 aa21.24■□□□□ 0.99
LSM4-202ENST00000593564 KLHL9Q9P2J3 617 aa21.24■□□□□ 0.99
LSM4-202ENST00000593564 FREM1Q5H8C1 2179 aa21.24■□□□□ 0.99
LSM4-202ENST00000593564 ZNF814B7Z6K7 855 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 CLOCKO15516 846 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 EIF4E2O60573 245 aaKnown RBP21.23■□□□□ 0.99
LSM4-202ENST00000593564 SLU7O95391 586 aaKnown RBP21.23■□□□□ 0.99
LSM4-202ENST00000593564 SOD3P08294 240 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 DANCRP0C864 163 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 PRPS1L1P21108 318 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 SLC7A1P30825 629 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 ITGADQ13349 1161 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 IL23RQ5VWK5 629 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 SEZ6L2Q6UXD5 910 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 RIMKLAQ8IXN7 391 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 KRTCAP2Q8N6L1 136 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 ZNF614Q8N883 585 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 TOR1AIP2Q8NFQ8 470 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.23■□□□□ 0.99
LSM4-202ENST00000593564 TRMT61AQ96FX7 289 aaKnown RBP21.23■□□□□ 0.99
LSM4-202ENST00000593564 OR7D2Q96RA2 312 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 MDFIQ99750 246 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 PSD2Q9BQI7 771 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 L2HGDHQ9H9P8 463 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 SLC17A7Q9P2U7 560 aa21.23■□□□□ 0.99
LSM4-202ENST00000593564 ING1Q9UK53 422 aaPredicted RBP21.23■□□□□ 0.99
LSM4-202ENST00000593564 ATRQ13535 2644 aa21.22■□□□□ 0.99
LSM4-202ENST00000593564 SONP18583 2426 aaKnown RBP21.22■□□□□ 0.99
LSM4-202ENST00000593564 ZNF264O43296 627 aa21.22■□□□□ 0.99
LSM4-202ENST00000593564 UBL4AP11441 157 aa21.22■□□□□ 0.99
LSM4-202ENST00000593564 SERPINB5P36952 375 aa21.22■□□□□ 0.99
LSM4-202ENST00000593564 CBFBQ13951 182 aa21.22■□□□□ 0.99
LSM4-202ENST00000593564 QPRTQ15274 297 aa21.22■□□□□ 0.99
LSM4-202ENST00000593564 CLEC12BQ2HXU8 276 aa21.22■□□□□ 0.99
LSM4-202ENST00000593564 ZNF672Q499Z4 452 aaPredicted RBP21.22■□□□□ 0.99
LSM4-202ENST00000593564 BHLHB9Q6PI77 547 aa21.22■□□□□ 0.99
LSM4-202ENST00000593564 Q6ZT83 130 aa21.22■□□□□ 0.99
LSM4-202ENST00000593564 ZNF619Q8N2I2 560 aa21.22■□□□□ 0.99
LSM4-202ENST00000593564 TMCO5AQ8N6Q1 288 aa21.22■□□□□ 0.99
LSM4-202ENST00000593564 FNDC5Q8NAU1 212 aa21.22■□□□□ 0.99
LSM4-202ENST00000593564 PIWIL2Q8TC59 973 aaKnown RBP21.22■□□□□ 0.99
LSM4-202ENST00000593564 SDF2Q99470 211 aa21.22■□□□□ 0.99
LSM4-202ENST00000593564 BHLHE41Q9C0J9 482 aaPredicted RBP21.22■□□□□ 0.99
LSM4-202ENST00000593564 NMUR2Q9GZQ4 415 aa21.22■□□□□ 0.99
LSM4-202ENST00000593564 NUP214P35658 2090 aaPredicted RBP21.21■□□□□ 0.99
LSM4-202ENST00000593564 IGHV3-15A0A0B4J1V0 119 aa21.21■□□□□ 0.99
LSM4-202ENST00000593564 A0A1W2PNR3 127 aa21.21■□□□□ 0.99
LSM4-202ENST00000593564 TLDC2A0PJX2 215 aa21.21■□□□□ 0.99
LSM4-202ENST00000593564 ESPNB1AK53 854 aa21.21■□□□□ 0.99
LSM4-202ENST00000593564 ARRB2P32121 409 aa21.21■□□□□ 0.99
LSM4-202ENST00000593564 OR3A2P47893 321 aa21.21■□□□□ 0.99
LSM4-202ENST00000593564 KRTAP1-1Q07627 177 aa21.21■□□□□ 0.99
LSM4-202ENST00000593564 VEZF1Q14119 521 aa21.21■□□□□ 0.99
LSM4-202ENST00000593564 C3orf33Q6P1S2 294 aa21.21■□□□□ 0.99
LSM4-202ENST00000593564 DNAJC14Q6Y2X3 702 aaPredicted RBP21.21■□□□□ 0.99
LSM4-202ENST00000593564 ZCCHC23Q6ZST2 131 aa21.21■□□□□ 0.99
LSM4-202ENST00000593564 BHLHA15Q7RTS1 189 aaPredicted RBP21.21■□□□□ 0.99
LSM4-202ENST00000593564 RIBC1Q8N443 379 aaPredicted RBP21.21■□□□□ 0.99
LSM4-202ENST00000593564 OR5D16Q8NGK9 328 aa21.21■□□□□ 0.99
LSM4-202ENST00000593564 OR5AK3PQ8NH89 298 aa21.21■□□□□ 0.99
LSM4-202ENST00000593564 RFWD2Q8NHY2 731 aa21.21■□□□□ 0.99
LSM4-202ENST00000593564 SMAP2Q8WU79 429 aaPredicted RBP21.21■□□□□ 0.99
LSM4-202ENST00000593564 NEUROG1Q92886 237 aa21.21■□□□□ 0.99
LSM4-202ENST00000593564 ARL8AQ96BM9 186 aa21.21■□□□□ 0.99
LSM4-202ENST00000593564 DUSP26Q9BV47 211 aa21.21■□□□□ 0.99
LSM4-202ENST00000593564 CADP27708 2225 aa21.2■□□□□ 0.98
LSM4-202ENST00000593564 COL6A5A8TX70 2615 aa21.2■□□□□ 0.98
LSM4-202ENST00000593564 SERINC4A6NH21 518 aa21.2■□□□□ 0.98
LSM4-202ENST00000593564 CFLARO15519 480 aa21.2■□□□□ 0.98
LSM4-202ENST00000593564 DNAJA2O60884 412 aa21.2■□□□□ 0.98
LSM4-202ENST00000593564 CCR4P51679 360 aa21.2■□□□□ 0.98
LSM4-202ENST00000593564 C21orf58P58505 322 aa21.2■□□□□ 0.98
LSM4-202ENST00000593564 HBA1P69905 142 aa21.2■□□□□ 0.98
LSM4-202ENST00000593564 BSPH1Q075Z2 132 aa21.2■□□□□ 0.98
LSM4-202ENST00000593564 PDZK1Q5T2W1 519 aa21.2■□□□□ 0.98
LSM4-202ENST00000593564 ATG4DQ86TL0 474 aaPredicted RBP21.2■□□□□ 0.98
LSM4-202ENST00000593564 OR2W6PQ8NHA6 318 aa21.2■□□□□ 0.98
LSM4-202ENST00000593564 ZDHHC2Q9UIJ5 367 aa21.2■□□□□ 0.98
LSM4-202ENST00000593564 ADAM21Q9UKJ8 722 aa21.2■□□□□ 0.98
LSM4-202ENST00000593564 MAGED1Q9Y5V3 778 aaPredicted RBP21.2■□□□□ 0.98
LSM4-202ENST00000593564 DPRXA6NFQ7 191 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 DUXAA6NLW8 204 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 SMAD9O15198 467 aaKnown RBP21.19■□□□□ 0.98
LSM4-202ENST00000593564 CYTIPO60759 359 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 SKAP2O75563 359 aaPredicted RBP21.19■□□□□ 0.98
LSM4-202ENST00000593564 AK1P00568 194 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 IDUAP35475 653 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 RASGEF1BQ0VAM2 473 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 SKP2Q13309 424 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 ZNF141Q15928 474 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 TIGD2Q4W5G0 525 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms