RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.49□□□□□ -0.09
LIG1-205ENST00000593425 R3HCC1LQ7Z5L2 792 aaKnown RBP14.49□□□□□ -0.09
LIG1-205ENST00000593425 DDIASQ8IXT1 998 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 CNPY4Q8N129 248 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 ZNF614Q8N883 585 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 ZNF527Q8NB42 609 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 RFWD2Q8NHY2 731 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 TWIST2Q8WVJ9 160 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 ZNF300Q96RE9 604 aaPredicted RBP14.49□□□□□ -0.09
LIG1-205ENST00000593425 RHOXF2Q9BQY4 288 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 TRAF4Q9BUZ4 470 aaPredicted RBP14.49□□□□□ -0.09
LIG1-205ENST00000593425 ACTRT3Q9BYD9 372 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 GPATCH2Q9NW75 528 aa14.49□□□□□ -0.09
LIG1-205ENST00000593425 PIP5K1BO14986 540 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 SMAD9O15198 467 aaKnown RBP14.48□□□□□ -0.09
LIG1-205ENST00000593425 CHEK2O96017 543 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 CD8AP01732 235 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 HPCAL1P37235 193 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 OR3A2P47893 321 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 CCT3P49368 545 aaKnown RBP14.48□□□□□ -0.09
LIG1-205ENST00000593425 ATP12AP54707 1039 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 PTGR1Q14914 329 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 STK11Q15831 433 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 UGT3A2Q3SY77 523 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 DNAJC14Q6Y2X3 702 aaPredicted RBP14.48□□□□□ -0.09
LIG1-205ENST00000593425 Q6ZT83 130 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 SLC43A2Q8N370 569 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 ADAMTS15Q8TE58 950 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 EPS8L3Q8TE67 593 aaKnown RBP14.48□□□□□ -0.09
LIG1-205ENST00000593425 MRGPRX4Q96LA9 322 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 HOXD1Q9GZZ0 328 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 NPAP1Q9NZP6 1156 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 KLHL9Q9P2J3 617 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 DTNAQ9Y4J8 743 aa14.48□□□□□ -0.09
LIG1-205ENST00000593425 ESPNB1AK53 854 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 SHISA9B4DS77 424 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 C9JVG2 144 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 H3BNH8 94 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 GTPBP1O00178 669 aaKnown RBP14.47□□□□□ -0.09
LIG1-205ENST00000593425 CD5LO43866 347 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 TRIM13O60858 407 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 H6PDO95479 791 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 C6orf47O95873 294 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 TP53P04637 393 aaPredicted RBP14.47□□□□□ -0.09
LIG1-205ENST00000593425 KRT4P19013 534 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 PTNP21246 168 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 SLC7A1P30825 629 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 CCR4P51679 360 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 C21orf58P58505 322 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 RAC3P60763 192 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 PPA1Q15181 289 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 QPRTQ15274 297 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 SLC25A53Q5H9E4 307 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 HMBOX1Q6NT76 420 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 TMCO5AQ8N6Q1 288 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 OR56A1Q8NGH5 318 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 OR5D16Q8NGK9 328 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 PSMA8Q8TAA3 256 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 OR5P2Q8WZ92 322 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 ZNF775Q96BV0 537 aaPredicted RBP14.47□□□□□ -0.09
LIG1-205ENST00000593425 TRMOQ9BU70 441 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 C1orf50Q9BV19 199 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 YAE1D1Q9NRH1 226 aa14.47□□□□□ -0.09
LIG1-205ENST00000593425 CISD1Q9NZ45 108 aaKnown RBP14.47□□□□□ -0.09
LIG1-205ENST00000593425 FAF1Q9UNN5 650 aaPredicted RBP14.47□□□□□ -0.09
LIG1-205ENST00000593425 TMEM114B3SHH9 223 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 ZNF264O43296 627 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 TLX2O43763 284 aaPredicted RBP14.46□□□□□ -0.09
LIG1-205ENST00000593425 CYTIPO60759 359 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 FGF4P08620 206 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 UBL4AP11441 157 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 IGHV1-2P23083 117 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 CDH11P55287 796 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 RASGEF1BQ0VAM2 473 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 XKR7Q5GH72 579 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 DTX2Q86UW9 622 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 OR5W2Q8NH69 310 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 OR5AK3PQ8NH89 298 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 AGR3Q8TD06 166 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 UBLCP1Q8WVY7 318 aaPredicted RBP14.46□□□□□ -0.09
LIG1-205ENST00000593425 ZNF75CPQ92670 426 aaPredicted RBP14.46□□□□□ -0.09
LIG1-205ENST00000593425 HS6ST2Q96MM7 605 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 OR5B2Q96R09 309 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 OR7D2Q96RA2 312 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 USB1Q9BQ65 265 aaKnown RBP14.46□□□□□ -0.09
LIG1-205ENST00000593425 QRSL1Q9H0R6 528 aaKnown RBP14.46□□□□□ -0.09
LIG1-205ENST00000593425 ALG2Q9H553 416 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 L2HGDHQ9H9P8 463 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 MID2Q9UJV3 735 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 TRAF6Q9Y4K3 522 aa14.46□□□□□ -0.09
LIG1-205ENST00000593425 CENPVL1A0A0U1RR11 272 aa14.45□□□□□ -0.1
LIG1-205ENST00000593425 ETV2O00321 342 aaPredicted RBP14.45□□□□□ -0.1
LIG1-205ENST00000593425 ABCD4O14678 606 aa14.45□□□□□ -0.1
LIG1-205ENST00000593425 PEX11AO75192 247 aa14.45□□□□□ -0.1
LIG1-205ENST00000593425 KRT16P08779 473 aa14.45□□□□□ -0.1
LIG1-205ENST00000593425 DDX5P17844 614 aaKnown RBP14.45□□□□□ -0.1
LIG1-205ENST00000593425 COX5AP20674 150 aa14.45□□□□□ -0.1
LIG1-205ENST00000593425 MAPK1P28482 360 aa14.45□□□□□ -0.1
LIG1-205ENST00000593425 ALDH3A1P30838 453 aa14.45□□□□□ -0.1
LIG1-205ENST00000593425 RPL3P39023 403 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms