RNA–Protein interactions for RNA: ENST00000592883.5

RFX2-223, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-223	ENST00000592883	NDUFS7	O75251	213 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	IGHV4-39	P01824	125 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	KRT4	P19013	534 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	EDNRA	P25101	427 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	HPCAL1	P37235	193 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	CCT3	P49368	545 aa	Known RBP	13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	SUMO3	P55854	103 aa	Predicted RBP	13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	ITGAD	Q13349	1161 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	ETFDH	Q16134	617 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	TDRP	Q86YL5	185 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	ADAMTS15	Q8TE58	950 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	ZNF775	Q96BV0	537 aa	Predicted RBP	13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	TRMO	Q9BU70	441 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	REPIN1	Q9BWE0	567 aa	Known RBP	13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	POTEKP	Q9BYX7	375 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	TRIM2	Q9C040	744 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	HOXD1	Q9GZZ0	328 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	BCO1	Q9HAY6	547 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	GP6	Q9HCN6	339 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	GPATCH2	Q9NW75	528 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	GDF2	Q9UK05	429 aa	Predicted RBP	13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	COL6A5	A8TX70	2615 aa		13.67	□□□□□ -0.22
RFX2-223	ENST00000592883	NPIPB9	F8W1W9	429 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883		H3BNH8	94 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	RAMP1	O60894	148 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	LYZL6	O75951	148 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	C6orf47	O95873	294 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	THBS1	P07996	1170 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	OR3A2	P47893	321 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	ATP12A	P54707	1039 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	SELENBP1	Q13228	472 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	PTGR1	Q14914	329 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	P2RY6	Q15077	328 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	STK11	Q15831	433 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883		Q6ZT83	130 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	SLC43A2	Q8N370	569 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	TMCO5A	Q8N6Q1	288 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	OR56A1	Q8NGH5	318 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	PSMA8	Q8TAA3	256 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	AGR3	Q8TD06	166 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	OR5P2	Q8WZ92	322 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	MRGPRX4	Q96LA9	322 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	ZNF300	Q96RE9	604 aa	Predicted RBP	13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	C1orf50	Q9BV19	199 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	KLHL9	Q9P2J3	617 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	MID2	Q9UJV3	735 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	FAF1	Q9UNN5	650 aa	Predicted RBP	13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	DTNA	Q9Y4J8	743 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	TRAF6	Q9Y4K3	522 aa		13.66	□□□□□ -0.22
RFX2-223	ENST00000592883	ESPN	B1AK53	854 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	TMEM114	B3SHH9	223 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	SMAD9	O15198	467 aa	Known RBP	13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	ADAM11	O75078	769 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	PEX11A	O75192	247 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	CD8A	P01732	235 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	FGF4	P08620	206 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	DDX5	P17844	614 aa	Known RBP	13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	PTN	P21246	168 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	SLC7A1	P30825	629 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	ALDH3A1	P30838	453 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	CCR4	P51679	360 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	RAC3	P60763	192 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	RASGEF1B	Q0VAM2	473 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	QPRT	Q15274	297 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	SPDYE7P	Q495Y7	208 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	ARL13A	Q5H913	290 aa	Predicted RBP	13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	SLC25A53	Q5H9E4	307 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	DNM1P46	Q6ZS02	220 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	OR5D16	Q8NGK9	328 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	OR5W2	Q8NH69	310 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	OR5AK3P	Q8NH89	298 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	C3orf30	Q96M34	536 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	OR7D2	Q96RA2	312 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	MECR	Q9BV79	373 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	HEATR1	Q9H583	2144 aa	Known RBP	13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	CISD1	Q9NZ45	108 aa	Known RBP	13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	ALPK2	Q86TB3	2170 aa		13.65	□□□□□ -0.22
RFX2-223	ENST00000592883	SHISA9	B4DS77	424 aa		13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	ZNF264	O43296	627 aa		13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	CD5L	O43866	347 aa		13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	CYTIP	O60759	359 aa		13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	H6PD	O95479	791 aa		13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	TP53	P04637	393 aa	Predicted RBP	13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	IGHV1-2	P23083	117 aa		13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	MAPK1	P28482	360 aa		13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	RPL3	P39023	403 aa	Known RBP	13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	C21orf58	P58505	322 aa		13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	RPS26	P62854	115 aa	Known RBP	13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	CBFB	Q13951	182 aa		13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	PPA1	Q15181	289 aa		13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	TIGD2	Q4W5G0	525 aa		13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	XKR7	Q5GH72	579 aa		13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	PDZK1	Q5T2W1	519 aa		13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	HMBOX1	Q6NT76	420 aa		13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	OLIG3	Q7RTU3	272 aa		13.64	□□□□□ -0.23
RFX2-223	ENST00000592883	KRTCAP2	Q8N6L1	136 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms