RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 RASGEF1AQ8N9B8 481 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR4M2Q8NGB6 313 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR5K2Q8NHB8 316 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 RBM18Q96H35 190 aaKnown RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 HSPA12BQ96MM6 686 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR7D2Q96RA2 312 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 UBL7Q96S82 380 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 ZNF587Q96SQ5 575 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 TSNAXQ99598 290 aaKnown RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 TIMM29Q9BSF4 260 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 TRMT61BQ9BVS5 477 aaKnown RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 C20orf85Q9H1P6 137 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SLC25A32Q9H2D1 315 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SRMSQ9H3Y6 488 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 RNF167Q9H6Y7 350 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 FBRSQ9HAH7 460 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 LIN7BQ9HAP6 207 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ADAP2Q9NPF8 381 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 WASH6PQ9NQA3 447 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ZFP57Q9NU63 452 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 FAM86C1Q9NVL1 165 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SLC39A1Q9NY26 324 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 TAAR2Q9P1P5 351 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 LAMP5Q9UJQ1 280 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 NCOR1O75376 2440 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 TSC2P49815 1807 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 MCM3APO60318 1980 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 LCTP09848 1927 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 LOC105369274A0A096LPK9 316 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 C2orf92A0A1B0GVN3 265 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SMIM30A4D0T7 59 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 MYADML2A6NDP7 307 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 TRABD2BA6NFA1 517 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 CHURC1-FNTBB4DL54 471 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SULT1C2O00338 296 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 HMGN4O00479 90 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 KHNYNO15037 678 aaKnown RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 SRPX2O60687 465 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 ASGR2P07307 311 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ERCC1P07992 297 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 CLEC2LP0C7M8 214 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 NR2C1P13056 603 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 GTF2F2P13984 249 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ELK1P19419 428 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 HIST1H1TP22492 207 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 BMPR1AP36894 532 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 GDNFP39905 211 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 TGM4P49221 684 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 TPMTP51580 245 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 FABP5Q01469 135 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 CD300CQ08708 224 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 NOGQ13253 232 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 POU4F3Q15319 338 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SYPL1Q16563 259 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 TCTE1Q5JU00 501 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 TOR2AQ5JU69 321 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 RAB12Q6IQ22 244 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 GSG1LQ6UXU4 331 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ZNF620Q6ZNG0 422 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 GAREM2Q75VX8 874 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 RNF44Q7L0R7 432 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OTOP2Q7RTS6 562 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 NKAIN4Q8IVV8 208 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR4N4Q8N0Y3 316 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SPICQ8N5J4 248 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 BEST4Q8NFU0 473 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR10H5Q8NGA6 315 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR4M1Q8NGD0 313 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR2T4Q8NH00 348 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ARL11Q969Q4 196 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 FOXRED1Q96CU9 486 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 AMDHD1Q96NU7 426 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 PTPN18Q99952 460 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 UQCC2Q9BRT2 126 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 RHNO1Q9BSD3 238 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR10A4Q9H209 315 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 METTL17Q9H7H0 456 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 KCNK12Q9HB15 430 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 PRDM9Q9NQV7 894 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 BIN3Q9NQY0 253 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 CNIH4Q9P003 139 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 PRODH2Q9UF12 536 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SLC7A7Q9UM01 511 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ZNF281Q9Y2X9 895 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 NOP16Q9Y3C1 178 aaKnown RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 DMDP11532 3685 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 RLFQ13129 1914 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 MEIKINA0A087WXM9 373 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 A0A0A6YYJ9 748 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 LRRC72A6NJI9 287 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SLC9B1P1A6NJY1 282 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 MCIDASD6RGH6 385 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ARPC1BO15143 372 aaKnown RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 GSTZ1O43708 216 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 SNAPINO95295 136 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 APOC3P02656 99 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ALDOBP05062 364 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 PNMTP11086 282 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 C6P13671 934 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms