RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 OTULINQ96BN8 352 aa13.21□□□□□ -0.29
RANBP3-229ENST00000592771 HSPA12BQ96MM6 686 aa13.21□□□□□ -0.29
RANBP3-229ENST00000592771 UBL7Q96S82 380 aaPredicted RBP13.21□□□□□ -0.29
RANBP3-229ENST00000592771 KCNJ15Q99712 375 aa13.21□□□□□ -0.29
RANBP3-229ENST00000592771 MAP3K3Q99759 626 aa13.21□□□□□ -0.29
RANBP3-229ENST00000592771 TM9SF2Q99805 663 aa13.21□□□□□ -0.29
RANBP3-229ENST00000592771 TMEM246Q9BRR3 403 aa13.21□□□□□ -0.29
RANBP3-229ENST00000592771 CHRNA10Q9GZZ6 450 aa13.21□□□□□ -0.29
RANBP3-229ENST00000592771 KCNN2Q9H2S1 579 aa13.21□□□□□ -0.29
RANBP3-229ENST00000592771 FN3KQ9H479 309 aa13.21□□□□□ -0.29
RANBP3-229ENST00000592771 NIPAL2Q9H841 368 aa13.21□□□□□ -0.29
RANBP3-229ENST00000592771 MTHFD2LQ9H903 347 aaPredicted RBP13.21□□□□□ -0.29
RANBP3-229ENST00000592771 CACYBPQ9HB71 228 aaKnown RBP13.21□□□□□ -0.29
RANBP3-229ENST00000592771 DUSP22Q9NRW4 184 aa13.21□□□□□ -0.29
RANBP3-229ENST00000592771 TOR4AQ9NXH8 423 aa13.21□□□□□ -0.29
RANBP3-229ENST00000592771 H2AFY2Q9P0M6 372 aaPredicted RBP13.21□□□□□ -0.29
RANBP3-229ENST00000592771 SATB2Q9UPW6 733 aa13.21□□□□□ -0.29
RANBP3-229ENST00000592771 GPR55Q9Y2T6 319 aaPredicted RBP13.21□□□□□ -0.29
RANBP3-229ENST00000592771 YARS2Q9Y2Z4 477 aaKnown RBP13.21□□□□□ -0.29
RANBP3-229ENST00000592771 CDH10Q9Y6N8 788 aa13.21□□□□□ -0.29
RANBP3-229ENST00000592771 ANKRD34BA5PLL1 514 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 GABRPO00591 440 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 SLC43A1O75387 559 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 RPS4Y1P22090 263 aaKnown RBP13.21□□□□□ -0.3
RANBP3-229ENST00000592771 MTNR1BP49286 362 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 ZP2Q05996 745 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 ZNF155Q12901 538 aaPredicted RBP13.21□□□□□ -0.3
RANBP3-229ENST00000592771 YIF1BQ5BJH7 314 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 ZNF620Q6ZNG0 422 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 NEIL3Q8TAT5 605 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 DNASE2BQ8WZ79 361 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 FAM46AQ96IP4 442 aaKnown RBP13.21□□□□□ -0.3
RANBP3-229ENST00000592771 STACQ99469 402 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 SDF2Q99470 211 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 ZNF649Q9BS31 505 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 TMEM43Q9BTV4 400 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 ZNF350Q9GZX5 532 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 RAB33BQ9H082 229 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 TBC1D17Q9HA65 648 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 COMMD3Q9UBI1 195 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 CBLCQ9ULV8 474 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 NOX1Q9Y5S8 564 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 SPTBP11277 2137 aa13.21□□□□□ -0.3
RANBP3-229ENST00000592771 VCANP13611 3396 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 FOXS1O43638 330 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 SLC35E2P0CK97 266 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 NT5EP21589 574 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 ALAS2P22557 587 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 CAPZA2P47755 286 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 CLDN20P56880 219 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 RGS8P57771 180 aaPredicted RBP13.2□□□□□ -0.3
RANBP3-229ENST00000592771 LSM11P83369 360 aaKnown RBP eCLIP13.2□□□□□ -0.3
RANBP3-229ENST00000592771 PLEKHM3Q6ZWE6 761 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 MARCH9Q86YJ5 346 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 PLCZ1Q86YW0 608 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 CDRT4Q8N9R6 151 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 SYT14Q8NB59 555 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 OR2T33Q8NG76 320 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 KCTD12Q96CX2 325 aaKnown RBP13.2□□□□□ -0.3
RANBP3-229ENST00000592771 SLC38A3Q99624 504 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 YIPF2Q9BWQ6 316 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 INPP5EQ9NRR6 644 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 NUFIP1Q9UHK0 495 aaKnown RBP13.2□□□□□ -0.3
RANBP3-229ENST00000592771 ZNF443Q9Y2A4 671 aaPredicted RBP13.2□□□□□ -0.3
RANBP3-229ENST00000592771 GPR52Q9Y2T5 361 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 WDR45Q9Y484 360 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 PCDH15Q96QU1 1955 aa13.2□□□□□ -0.3
RANBP3-229ENST00000592771 LINC00854A0A1B0GVQ3 168 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 CPSF4LA6NMK7 179 aaKnown RBP13.19□□□□□ -0.3
RANBP3-229ENST00000592771 LYRM1O43325 122 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 THBS1P07996 1170 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 CT62P0C5K7 136 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 FAM157BP0CG42 384 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 GNSP15586 552 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 BCKDHBP21953 392 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 APEX1P27695 318 aaKnown RBP13.19□□□□□ -0.3
RANBP3-229ENST00000592771 DUSP8Q13202 625 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 FAM53BQ14153 422 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 TRAM1Q15629 374 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 C14orf28Q4W4Y0 310 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 EIPR1Q53HC9 387 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 ZNF322Q6U7Q0 402 aaPredicted RBP13.19□□□□□ -0.3
RANBP3-229ENST00000592771 LHFPL3Q86UP9 236 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 RNF113BQ8IZP6 322 aaKnown RBP13.19□□□□□ -0.3
RANBP3-229ENST00000592771 OR4Q3Q8NH05 313 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 BRIX1Q8TDN6 353 aaKnown RBP13.19□□□□□ -0.3
RANBP3-229ENST00000592771 SPACA7Q96KW9 195 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 DMRTB1Q96MA1 342 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 MCHR1Q99705 422 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 MARVELD1Q9BSK0 173 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 RANGRFQ9HD47 186 aaPredicted RBP13.19□□□□□ -0.3
RANBP3-229ENST00000592771 ADAP2Q9NPF8 381 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 CTPS2Q9NRF8 586 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 PAQR5Q9NXK6 330 aaPredicted RBP13.19□□□□□ -0.3
RANBP3-229ENST00000592771 CNIH4Q9P003 139 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 TNFRSF10DQ9UBN6 386 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 EPHA6Q9UF33 1036 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 BLACEA4D250 179 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 TLCD2A6NGC4 264 aa13.19□□□□□ -0.3
RANBP3-229ENST00000592771 J3QRE1 110 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms