RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 H6PDO95479 791 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 HSPA4LO95757 839 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 LINC00032P0C843 101 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 BCKDHAP12694 445 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 COX5AP20674 150 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 IGHV1-2P23083 117 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 SUMO3P55854 103 aaPredicted RBP12.3□□□□□ -0.44
SF3A2-205ENST00000590034 STK11Q15831 433 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 GALNTL6Q49A17 601 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 LIPMQ5VYY2 423 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 KANK2Q63ZY3 851 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 CDC73Q6P1J9 531 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 PODNL1Q6PEZ8 512 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 RNF165Q6ZSG1 346 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 OR7A2PQ8NGA2 310 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 ZNF75CPQ92670 426 aaPredicted RBP12.3□□□□□ -0.44
SF3A2-205ENST00000590034 ZNF775Q96BV0 537 aaPredicted RBP12.3□□□□□ -0.44
SF3A2-205ENST00000590034 CHMP6Q96FZ7 201 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 HS6ST2Q96MM7 605 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 GRIP2Q9C0E4 1043 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 IQCGQ9H095 443 aaKnown RBP12.3□□□□□ -0.44
SF3A2-205ENST00000590034 GPATCH2Q9NW75 528 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 GIMAP2Q9UG22 337 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 B3GALT5Q9Y2C3 310 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 DNAJC15Q9Y5T4 150 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 MALRD1Q5VYJ5 2156 aa12.3□□□□□ -0.44
SF3A2-205ENST00000590034 GOLGA8QA0A0J9YX86 632 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 GOLGA8OA6NCC3 632 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 A8MV72 311 aaPredicted RBP12.29□□□□□ -0.44
SF3A2-205ENST00000590034 GOLGA8NF8WBI6 632 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 ETV2O00321 342 aaPredicted RBP12.29□□□□□ -0.44
SF3A2-205ENST00000590034 ABCD4O14678 606 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 SSX4O60224 188 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 LAMP1P11279 417 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 NEFHP12036 1026 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 CPA3P15088 417 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 CDH11P55287 796 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 RAC3P60763 192 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 IRX1P78414 480 aaPredicted RBP12.29□□□□□ -0.44
SF3A2-205ENST00000590034 SPOCK1Q08629 439 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 SELENBP1Q13228 472 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 MLC1Q15049 377 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 PPA1Q15181 289 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 CCDC153Q494R4 210 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 SLC25A53Q5H9E4 307 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 DCST2Q5T1A1 773 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 SLC43A2Q8N370 569 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 MTERF3Q96E29 417 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 MRGPRX4Q96LA9 322 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 GATA5Q9BWX5 397 aaPredicted RBP12.29□□□□□ -0.44
SF3A2-205ENST00000590034 ALG2Q9H553 416 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 KLHL9Q9P2J3 617 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 ATP6V1HQ9UI12 483 aa12.29□□□□□ -0.44
SF3A2-205ENST00000590034 HEATR1Q9H583 2144 aaKnown RBP12.29□□□□□ -0.44
SF3A2-205ENST00000590034 ANK2Q01484 3957 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 CENPVL1A0A0U1RR11 272 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 SCAMP2O15127 329 aaKnown RBP12.28□□□□□ -0.44
SF3A2-205ENST00000590034 CYTIPO60759 359 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 SHBGP04278 402 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 ATP6V1C1P21283 382 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 SLC7A1P30825 629 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 CRHR1P34998 444 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 ATP12AP54707 1039 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 RASGEF1BQ0VAM2 473 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 TP53BP2Q13625 1128 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 PTGR1Q14914 329 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 PCLAFQ15004 111 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 QPRTQ15274 297 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 CHRFAM7AQ494W8 412 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 C6orf52Q5T4I8 152 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 C11orf71Q6IPW1 123 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 LSRQ86X29 649 aaPredicted RBP12.28□□□□□ -0.44
SF3A2-205ENST00000590034 C10orf107Q8IVU9 208 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 GSPT2Q8IYD1 628 aaKnown RBP12.28□□□□□ -0.44
SF3A2-205ENST00000590034 ZNF614Q8N883 585 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 ZNF527Q8NB42 609 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 MNS1Q8NEH6 495 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 OR10H5Q8NGA6 315 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 RFWD2Q8NHY2 731 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 PSMA8Q8TAA3 256 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 HTRA1Q92743 480 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 USB1Q9BQ65 265 aaKnown RBP12.28□□□□□ -0.44
SF3A2-205ENST00000590034 CACNG6Q9BXT2 260 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 ACTRT3Q9BYD9 372 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 QRSL1Q9H0R6 528 aaKnown RBP12.28□□□□□ -0.44
SF3A2-205ENST00000590034 BARX1Q9HBU1 254 aaPredicted RBP12.28□□□□□ -0.44
SF3A2-205ENST00000590034 KCNE5Q9UJ90 142 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 TMED5Q9Y3A6 229 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 DTNAQ9Y4J8 743 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 ARFGEF3Q5TH69 2177 aa12.28□□□□□ -0.44
SF3A2-205ENST00000590034 E7EQL1 145 aa12.27□□□□□ -0.45
SF3A2-205ENST00000590034 PHF1O43189 567 aaPredicted RBP12.27□□□□□ -0.45
SF3A2-205ENST00000590034 PGM3O95394 542 aa12.27□□□□□ -0.45
SF3A2-205ENST00000590034 IFNA2P01563 188 aa12.27□□□□□ -0.45
SF3A2-205ENST00000590034 CHRNGP07510 517 aa12.27□□□□□ -0.45
SF3A2-205ENST00000590034 ASMTP46597 345 aa12.27□□□□□ -0.45
SF3A2-205ENST00000590034 CCT3P49368 545 aaKnown RBP12.27□□□□□ -0.45
SF3A2-205ENST00000590034 CCR4P51679 360 aa12.27□□□□□ -0.45
SF3A2-205ENST00000590034 SKP2Q13309 424 aa12.27□□□□□ -0.45
SF3A2-205ENST00000590034 TMEM249Q2WGJ8 235 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms