RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 NAA11Q9BSU3 229 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 EPHX3Q9H6B9 360 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 STOX2Q9P2F5 926 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 RPH3ALQ9UNE2 315 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ANAPC1Q9H1A4 1944 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 A0A1B0GTL3 188 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 LEFTY2O00292 366 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SPDEFO95238 335 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 WISP3O95389 354 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 PIRTP0C851 137 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 TMIGD3P0DMS9 266 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 PKMP14618 531 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 FOSL2P15408 326 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 CD1DP15813 335 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 RHOQP17081 205 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 PRPS1L1P21108 318 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 CD200P41217 278 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 EVX1P49640 407 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 PRKXP51817 358 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 NFKB2Q00653 900 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 MELKQ14680 651 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 RNF219Q5W0B1 726 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 AFMIDQ63HM1 303 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 LRRC28Q86X40 367 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 CMTM8Q8IZV2 173 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 GPR26Q8NDV2 337 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 OR5M1Q8NGP8 315 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 HRASLS5Q96KN8 279 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 TLNRD1Q9H1K6 362 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SLC25A51Q9H1U9 297 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 PTGES2Q9H7Z7 377 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ACSS1Q9NUB1 689 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 PARPBPQ9NWS1 579 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 H2AFY2Q9P0M6 372 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 OR10H1Q9Y4A9 318 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 TMEM184BQ9Y519 407 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 WNT6Q9Y6F9 365 aa11.09□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SMIM30A4D0T7 59 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 MCIDASD6RGH6 385 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 PRR23D1E9PI22 279 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 MID1O15344 667 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 PRR23D2P0DMB1 279 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 PPP2R1BP30154 601 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 CTBP2P56545 445 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 SEC61A1P61619 476 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 OR4D1Q15615 310 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 CARD16Q5EG05 197 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 MTFR2Q6P444 385 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 ABHD13Q7L211 337 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 ARL14Q8N4G2 192 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 BOLLQ8N9W6 283 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 TMEM163Q8TC26 289 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 IMP4Q96G21 291 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 TEX37Q96LM6 180 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 CDCA4Q9BXL8 241 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 MFSD1Q9H3U5 465 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 MAGIXQ9H6Y5 334 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 SMCO4Q9NRQ5 59 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 GAR1Q9NY12 217 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 PDP1Q9P0J1 537 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 BLOC1S5-TXNDC5H3BN57 136 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 IGF2P01344 180 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 PMP2P02689 132 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 THBS1P07996 1170 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 PEPDP12955 493 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 GKP32189 559 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 RGRP47804 291 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 CD81P60033 236 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 GTF2H3Q13889 308 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 SLBPQ14493 270 aaKnown RBP eCLIP11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 ZSWIM7Q19AV6 140 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 SLC30A6Q6NXT4 461 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 ZNF549Q6P9A3 640 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 CHRDL2Q6WN34 429 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 ZNF730Q6ZMV8 503 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 NUP54Q7Z3B4 507 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 TMEM25Q86YD3 366 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 CFAP206Q8IYR0 622 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 APCDD1Q8J025 514 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 BEND2Q8NDZ0 799 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 TRIM2Q9C040 744 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 SEMA4BQ9NPR2 832 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 RAD18Q9NS91 495 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 RASL12Q9NYN1 266 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 NTMQ9P121 344 aa11.08□□□□□ -0.64
CDK5RAP3-232ENST00000584168 GFRA2O00451 464 aa11.07□□□□□ -0.64
CDK5RAP3-232ENST00000584168 IMPA2O14732 288 aa11.07□□□□□ -0.64
CDK5RAP3-232ENST00000584168 PIAS2O75928 621 aa11.07□□□□□ -0.64
CDK5RAP3-232ENST00000584168 OPN1LWP04000 364 aa11.07□□□□□ -0.64
CDK5RAP3-232ENST00000584168 MTHFD2P13995 350 aa11.07□□□□□ -0.64
CDK5RAP3-232ENST00000584168 ACPPP15309 386 aa11.07□□□□□ -0.64
CDK5RAP3-232ENST00000584168 UGT2B7P16662 529 aa11.07□□□□□ -0.64
CDK5RAP3-232ENST00000584168 CDKN1BP46527 198 aa11.07□□□□□ -0.64
CDK5RAP3-232ENST00000584168 BDKRB1P46663 353 aa11.07□□□□□ -0.64
CDK5RAP3-232ENST00000584168 PRR5P85299 388 aa11.07□□□□□ -0.64
CDK5RAP3-232ENST00000584168 RING1Q06587 406 aa11.07□□□□□ -0.64
CDK5RAP3-232ENST00000584168 DLX2Q07687 328 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-232ENST00000584168 MOB3CQ70IA8 216 aa11.07□□□□□ -0.64
CDK5RAP3-232ENST00000584168 RANBP3LQ86VV4 465 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-232ENST00000584168 OR2G2Q8NGZ5 317 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms