RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 HINT3Q9NQE9 182 aaKnown RBP12.66□□□□□ -0.38
SRSF1-205ENST00000582730 EXOSC1Q9Y3B2 195 aaKnown RBP12.66□□□□□ -0.38
SRSF1-205ENST00000582730 A0A0B4J293 547 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 KDM4EB2RXH2 506 aaPredicted RBP12.66□□□□□ -0.38
SRSF1-205ENST00000582730 CBX7O95931 251 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 CSF2P04141 144 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 LIMS3P0CW19 117 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 LIMS4P0CW20 117 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 MAKP20794 623 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 PAICSP22234 425 aaKnown RBP12.66□□□□□ -0.38
SRSF1-205ENST00000582730 MYL9P24844 172 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 SLC1A3P43003 542 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 SCN1BQ07699 218 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 MGAT2Q10469 447 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 HNRNPA0Q13151 305 aaKnown RBP12.66□□□□□ -0.38
SRSF1-205ENST00000582730 MANEAQ5SRI9 462 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 GDPGP1Q6ZNW5 385 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 CXXC5Q7LFL8 322 aaKnown RBP12.66□□□□□ -0.38
SRSF1-205ENST00000582730 CDK20Q8IZL9 346 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 SYT14Q8NB59 555 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 OR13C2Q8NGS9 318 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 OR5H6Q8NGV6 325 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 OR51A7Q8NH64 312 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 RIT1Q92963 219 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 SNAPC3Q92966 411 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 RNF31Q96EP0 1072 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 SECISBP2Q96T21 854 aaKnown RBP12.66□□□□□ -0.38
SRSF1-205ENST00000582730 SLC38A3Q99624 504 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 GON7Q9BXV9 100 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 SLC22A4Q9H015 551 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 SIDT1Q9NXL6 827 aaKnown RBP12.66□□□□□ -0.38
SRSF1-205ENST00000582730 SATB2Q9UPW6 733 aa12.66□□□□□ -0.38
SRSF1-205ENST00000582730 B4DXG7 233 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 GAS1P54826 345 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 ZNF267Q14586 743 aaPredicted RBP12.65□□□□□ -0.38
SRSF1-205ENST00000582730 TDHQ8IZJ6 230 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 UBE2J2Q8N2K1 259 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 POGLUT1Q8NBL1 392 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 TMED9Q9BVK6 235 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 IFT27Q9BW83 186 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 TMEM27Q9HBJ8 222 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 FGF20Q9NP95 211 aaPredicted RBP12.65□□□□□ -0.38
SRSF1-205ENST00000582730 LRP4O75096 1905 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 TRAV27A0A087WT01 109 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 SLC30A4O14863 429 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 BRINP1O60477 761 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 HMGN1P05114 100 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 SLC35E2P0CK97 266 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 CPEP16870 476 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 OR3A3P47888 321 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 EFR3AQ14156 821 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 AADACL4Q5VUY2 407 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 CAMKK1Q8N5S9 505 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 ENKD1Q9H0I2 346 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 C11orf54Q9H0W9 315 aaPredicted RBP12.65□□□□□ -0.38
SRSF1-205ENST00000582730 LMAN1LQ9HAT1 526 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 STMN3Q9NZ72 180 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 MED31Q9Y3C7 131 aa12.65□□□□□ -0.38
SRSF1-205ENST00000582730 KLF4O43474 513 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 SDC3O75056 442 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 ZNF780AO75290 641 aaPredicted RBP12.64□□□□□ -0.39
SRSF1-205ENST00000582730 IFNA16P05015 189 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 NAT1P18440 290 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 CELP19835 753 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 PSPHP78330 225 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 BTG2P78543 158 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 CCDC85BQ15834 202 aaPredicted RBP12.64□□□□□ -0.39
SRSF1-205ENST00000582730 RNLSQ5VYX0 342 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 MRGPREQ86SM8 312 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 TOR1AIP2Q8NFQ8 470 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 BPIFA2Q96DR5 249 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 MMABQ96EY8 250 aaPredicted RBP12.64□□□□□ -0.39
SRSF1-205ENST00000582730 HS6ST2Q96MM7 605 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 TGM7Q96PF1 710 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 ARPC5LQ9BPX5 153 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 TWSG1Q9GZX9 223 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 OR51V1Q9H2C8 321 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 TNFRSF10DQ9UBN6 386 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 TMEM129A0AVI4 362 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 C12orf71A8MTZ7 269 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 PRKNO60260 465 aaPredicted RBP12.64□□□□□ -0.39
SRSF1-205ENST00000582730 AK1P00568 194 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 ZGLP1P0C6A0 271 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 RNH1P13489 461 aaKnown RBP12.64□□□□□ -0.39
SRSF1-205ENST00000582730 SDC2P34741 201 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 BMP8BP34820 402 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 EMDP50402 254 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 FAPQ12884 760 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 PAMR1Q6UXH9 720 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 BMP8AQ7Z5Y6 402 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 RDH10Q8IZV5 341 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 ARL14Q8N4G2 192 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 ZFAND1Q8TCF1 268 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 KCTD7Q96MP8 289 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 FRMD6Q96NE9 622 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 FOLH1BQ9HBA9 442 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 PRDM9Q9NQV7 894 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 PRTFDC1Q9NRG1 225 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 OR10H1Q9Y4A9 318 aa12.64□□□□□ -0.39
SRSF1-205ENST00000582730 LALBAP00709 142 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms