RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 CARD8Q9Y2G2 431 aa9.41□□□□□ -0.9
RFFL-209ENST00000581265 FIS1Q9Y3D6 152 aa9.41□□□□□ -0.9
RFFL-209ENST00000581265 DPRXA6NFQ7 191 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 ESPNB1AK53 854 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 RNF223E7ERA6 249 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 GTPBP1O00178 669 aaKnown RBP9.4□□□□□ -0.9
RFFL-209ENST00000581265 PIP5K1BO14986 540 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 CLOCKO15516 846 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 PHF1O43189 567 aaPredicted RBP9.4□□□□□ -0.9
RFFL-209ENST00000581265 NPHS1O60500 1241 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 EIF4E2O60573 245 aaKnown RBP9.4□□□□□ -0.9
RFFL-209ENST00000581265 DNAJA2O60884 412 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 LYPLA1O75608 230 aaPredicted RBP9.4□□□□□ -0.9
RFFL-209ENST00000581265 FESP07332 822 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 CHRNGP07510 517 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 KRT16P08779 473 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 MAPK1P28482 360 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 HPCAL1P37235 193 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 OR3A2P47893 321 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 PGGHGQ32M88 737 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 LSM12Q3MHD2 195 aaKnown RBP9.4□□□□□ -0.9
RFFL-209ENST00000581265 ZNF672Q499Z4 452 aaPredicted RBP9.4□□□□□ -0.9
RFFL-209ENST00000581265 ARL13AQ5H913 290 aaPredicted RBP9.4□□□□□ -0.9
RFFL-209ENST00000581265 DCST2Q5T1A1 773 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 DNM1P46Q6ZS02 220 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 Q6ZT83 130 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 SSX8Q7RTT4 187 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 DDIASQ8IXT1 998 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 C4orf33Q8N1A6 199 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 BANPQ8N9N5 519 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 OR56A1Q8NGH5 318 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 ZFP90Q8TF47 636 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 TWIST2Q8WVJ9 160 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 ZNF524Q96C55 264 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 CHMP6Q96FZ7 201 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 POTEKPQ9BYX7 375 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 TRIM2Q9C040 744 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 SLCO5A1Q9H2Y9 848 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 CXorf36Q9H7Y0 433 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 L2HGDHQ9H9P8 463 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 EML4Q9HC35 981 aaKnown RBP9.4□□□□□ -0.9
RFFL-209ENST00000581265 ATAD3AQ9NVI7 634 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 KLHL9Q9P2J3 617 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 LIPT1Q9Y234 373 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 DTNAQ9Y4J8 743 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 KCNE3Q9Y6H6 103 aa9.4□□□□□ -0.9
RFFL-209ENST00000581265 NPIPA5A0A0B4J1W7 369 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 TMEM233B4DJY2 109 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 NPIPA7E9PJI5 369 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 ZNF264O43296 627 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 PEX11AO75192 247 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 CD8AP01732 235 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 NPIPA8P0DM63 369 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 PRPS1L1P21108 318 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 SLC7A1P30825 629 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 BSPH1Q075Z2 132 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 SELENBP1Q13228 472 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 TP53BP2Q13625 1128 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 VEZF1Q14119 521 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 PTGR1Q14914 329 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 XKR7Q5GH72 579 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 C6orf136Q5SQH8 315 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 BHLHA15Q7RTS1 189 aaPredicted RBP9.39□□□□□ -0.91
RFFL-209ENST00000581265 ATG4DQ86TL0 474 aaPredicted RBP9.39□□□□□ -0.91
RFFL-209ENST00000581265 P2RY8Q86VZ1 359 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 RIMKLAQ8IXN7 391 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 ATP6V1C2Q8NEY4 427 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 TOR1AIP2Q8NFQ8 470 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 SFXN5Q8TD22 340 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 UBLCP1Q8WVY7 318 aaPredicted RBP9.39□□□□□ -0.91
RFFL-209ENST00000581265 ZNF75CPQ92670 426 aaPredicted RBP9.39□□□□□ -0.91
RFFL-209ENST00000581265 NEUROG1Q92886 237 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 GTPBP3Q969Y2 492 aaKnown RBP9.39□□□□□ -0.91
RFFL-209ENST00000581265 ARL8AQ96BM9 186 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 MOAP1Q96BY2 351 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 SDF2Q99470 211 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 PRPF18Q99633 342 aaKnown RBP9.39□□□□□ -0.91
RFFL-209ENST00000581265 PSD2Q9BQI7 771 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 AMBRA1Q9C0C7 1298 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 NMUR2Q9GZQ4 415 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 ANKZF1Q9H8Y5 726 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 MKS1Q9NXB0 559 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 MAGED1Q9Y5V3 778 aaPredicted RBP9.39□□□□□ -0.91
RFFL-209ENST00000581265 PLCE1Q9P212 2302 aa9.39□□□□□ -0.91
RFFL-209ENST00000581265 CHD3Q12873 2000 aaKnown RBP9.38□□□□□ -0.91
RFFL-209ENST00000581265 A0A1W2PNR3 127 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 A0A1W2PP18 115 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 SERINC4A6NH21 518 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 SMIM23A6NLE4 172 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 DUXAA6NLW8 204 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 ZNF724A8MTY0 619 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 TLX2O43763 284 aaPredicted RBP9.38□□□□□ -0.91
RFFL-209ENST00000581265 CYTIPO60759 359 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 SLU7O95391 586 aaKnown RBP9.38□□□□□ -0.91
RFFL-209ENST00000581265 PGM3O95394 542 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 C6orf47O95873 294 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 ALDH3A1P30838 453 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 ACVR1BP36896 505 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 CDKN1AP38936 164 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 RNF144AP50876 292 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms