RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ACKR4Q9NPB9 350 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 SERINC1Q9NRX5 453 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 TAS2R10Q9NYW0 307 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 FBXL2Q9UKC9 423 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 HEATR5AQ86XA9 2040 aa12.99□□□□□ -0.33
SKA2-205ENST00000580541 A0A0G2JMM0 328 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 A0A1W2PPB8 328 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 A0A1W2PRS3 328 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 DHRS12A0PJE2 317 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 PINLYPA6NC86 204 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 LRRC3CA6NJW4 275 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 KIR3DP1A8MWS1 328 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 ADAM10O14672 748 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 GMFGO60234 142 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 CDC40O60508 579 aaKnown RBP eCLIP12.98□□□□□ -0.33
SKA2-205ENST00000580541 HPNP05981 417 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 RAP2AP10114 183 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 ATP6V1B2P21281 511 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 APOBEC1P41238 236 aaKnown RBP12.98□□□□□ -0.33
SKA2-205ENST00000580541 ACAA2P42765 397 aaKnown RBP12.98□□□□□ -0.33
SKA2-205ENST00000580541 RNF144AP50876 292 aaPredicted RBP12.98□□□□□ -0.33
SKA2-205ENST00000580541 SMIM11AP58511 58 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 ACTR3P61158 418 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 QPRTQ15274 297 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 ZNF613Q6PF04 617 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 ULK3Q6PHR2 472 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 GRINAQ7Z429 371 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 VTCN1Q7Z7D3 282 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 TMEM251Q8N6I4 163 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 OR6T1Q8NGN1 323 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 VANGL1Q8TAA9 524 aaPredicted RBP12.98□□□□□ -0.33
SKA2-205ENST00000580541 UTP4Q969X6 686 aaKnown RBP12.98□□□□□ -0.33
SKA2-205ENST00000580541 SEPHS2Q99611 448 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 UBQLN3Q9H347 655 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 EXO5Q9H790 373 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 ZNF703Q9H7S9 590 aaPredicted RBP12.98□□□□□ -0.33
SKA2-205ENST00000580541 IL1RAPQ9NPH3 570 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 ACER3Q9NUN7 267 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 MED17Q9NVC6 651 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 AURKCQ9UQB9 309 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 CHST2Q9Y4C5 530 aa12.98□□□□□ -0.33
SKA2-205ENST00000580541 SPIN1Q9Y657 262 aaPredicted RBP12.98□□□□□ -0.33
SKA2-205ENST00000580541 DSPP15924 2871 aaKnown RBP12.98□□□□□ -0.33
SKA2-205ENST00000580541 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 TCRBV5S2A0A599 114 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 TCRBV3S1A0A5B6 114 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 C7orf72A4D263 438 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 TTLL8A6PVC2 850 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 FAM166BA8MTA8 275 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 M0R3H8 397 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 SUSD5O60279 629 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 HCN1O60741 890 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 FABP3P05413 133 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 THRBP10828 461 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 PNMTP11086 282 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 ZNF17P17021 662 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 RHCEP18577 417 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 OR1E2P47887 323 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 SESN3P58005 492 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 TAS2R41P59536 307 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 INPP5JQ15735 1006 aaPredicted RBP12.97□□□□□ -0.33
SKA2-205ENST00000580541 NDUFAF6Q330K2 333 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 SWT1Q5T5J6 900 aaKnown RBP12.97□□□□□ -0.33
SKA2-205ENST00000580541 ZFP1Q6P2D0 407 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 ENPP6Q6UWR7 440 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 PIWIL3Q7Z3Z3 882 aaKnown RBP12.97□□□□□ -0.33
SKA2-205ENST00000580541 CADM2Q8N3J6 435 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 OR2B2Q9GZK3 357 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 ZDHHC11Q9H8X9 412 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 C12orf10Q9HB07 376 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 VDAC3Q9Y277 283 aa12.97□□□□□ -0.33
SKA2-205ENST00000580541 PCNX3Q9H6A9 2034 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 PIEZO2Q9H5I5 2752 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 TRAPPC13A5PLN9 417 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 GJE1A6NN92 205 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 TMEM229AB2RXF0 380 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 OIP5O43482 229 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 FRS3O43559 492 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 ZIC3O60481 467 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 EPPINO95925 133 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 RFPL3SP0C7P2 107 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 PRKCAP17252 672 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 CHMP24386 653 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 CXCR1P25024 350 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 RFC3P40938 356 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 MAGEA5P43359 124 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 POLR2HP52434 150 aaKnown RBP12.96□□□□□ -0.33
SKA2-205ENST00000580541 ZNF136P52737 540 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 ST3GAL3Q11203 375 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 OR1Q1Q15612 314 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 PLPPR5Q32ZL2 321 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 SLC25A53Q5H9E4 307 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 ENTPD8Q5MY95 495 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 RAET1LQ5VY80 246 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 ARSKQ6UWY0 536 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 DEF8Q6ZN54 512 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 PLEKHM3Q6ZWE6 761 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 ZDHHC21Q8IVQ6 265 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 GTPBP8Q8N3Z3 284 aaPredicted RBP12.96□□□□□ -0.33
SKA2-205ENST00000580541 CISD2Q8N5K1 135 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms