RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 HOXB1P14653 301 aaPredicted RBP9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 EDNRAP25101 427 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 OR3A2P47893 321 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 CCT3P49368 545 aaKnown RBP9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 RNF144AP50876 292 aaPredicted RBP9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 ATP12AP54707 1039 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 RPL38P63173 70 aaKnown RBP9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 NDUFAF6Q330K2 333 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 BHLHA15Q7RTS1 189 aaPredicted RBP9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 DTX2Q86UW9 622 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 HIPK1Q86Z02 1210 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 BANPQ8N9N5 519 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 ZNF527Q8NB42 609 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 KBTBD8Q8NFY9 601 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 OR7A2PQ8NGA2 310 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 OR5W2Q8NH69 310 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 ZFP90Q8TF47 636 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 OR5P2Q8WZ92 322 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 JADE3Q92613 823 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 COQ8BQ96D53 544 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 PSD2Q9BQI7 771 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 TRAF4Q9BUZ4 470 aaPredicted RBP9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 ACTRT3Q9BYD9 372 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 ANKZF1Q9H8Y5 726 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 DTNAQ9Y4J8 743 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 TRAF6Q9Y4K3 522 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 CADP27708 2225 aa9.43□□□□□ -0.9
CSNK1D-210ENST00000579308 A0A096LNT2 108 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 IGHV3-15A0A0B4J1V0 119 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 ZNF724A8MTY0 619 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 TMEM233B4DJY2 109 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 H3BNH8 94 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 GTPBP1O00178 669 aaKnown RBP9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 SCAMP2O15127 329 aaKnown RBP9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 EIF4E2O60573 245 aaKnown RBP9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 CYTIPO60759 359 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 TRIM13O60858 407 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 ADAM11O75078 769 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 PGM3O95394 542 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 FESP07332 822 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 CHRNGP07510 517 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 KRT4P19013 534 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 COX5AP20674 150 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 ATP6V1C1P21283 382 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 SELENBP1Q13228 472 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 PCLAFQ15004 111 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 GALNTL6Q49A17 601 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 XKR7Q5GH72 579 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 DCST2Q5T1A1 773 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 HOMEZQ8IX15 550 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 ATP6V1C2Q8NEY4 427 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 ADAMTS15Q8TE58 950 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 GTPBP3Q969Y2 492 aaKnown RBP9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 RNF166Q96A37 237 aaPredicted RBP9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 SDF2Q99470 211 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 L2HGDHQ9H9P8 463 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 CISD1Q9NZ45 108 aaKnown RBP9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 NPAP1Q9NZP6 1156 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 KLHL9Q9P2J3 617 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 GIMAP2Q9UG22 337 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 PRSS50Q9UI38 385 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 KCNE5Q9UJ90 142 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 GDF2Q9UK05 429 aaPredicted RBP9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 FIS1Q9Y3D6 152 aa9.42□□□□□ -0.9
CSNK1D-210ENST00000579308 A0A1W2PNR3 127 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 A0A1W2PP18 115 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 TMEM114B3SHH9 223 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 C9JVG2 144 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 COPEO14579 308 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 PIP5K1BO14986 540 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 SMAD9O15198 467 aaKnown RBP9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 LYZL6O75951 148 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 H6PDO95479 791 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 NUDT14O95848 222 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 C6orf47O95873 294 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 CHEK2O96017 543 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 DDX5P17844 614 aaKnown RBP9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 IGHV1-2P23083 117 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 HPCAL1P37235 193 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 RPL3P39023 403 aaKnown RBP9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 C21orf58P58505 322 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 RASGEF1BQ0VAM2 473 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 FAPQ12884 760 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 PPA1Q15181 289 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 QPRTQ15274 297 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 ZNF141Q15928 474 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 ARL13AQ5H913 290 aaPredicted RBP9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 TIMM23BQ5SRD1 257 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 AP1ARQ63HQ0 302 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 HMBOX1Q6NT76 420 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 SSX8Q7RTT4 187 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 P2RY8Q86VZ1 359 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 RIMKLAQ8IXN7 391 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 NATD1Q8N6N6 113 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 CCDC63Q8NA47 563 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 OR10H5Q8NGA6 315 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 OR56A1Q8NGH5 318 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 SFXN5Q8TD22 340 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 TWIST2Q8WVJ9 160 aa9.41□□□□□ -0.9
CSNK1D-210ENST00000579308 ZNF775Q96BV0 537 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms