RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 PTGS2P35354 604 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 CRATP43155 626 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 STARP49675 285 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 ATP12AP54707 1039 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 PSMD4P55036 377 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 TPD52P55327 224 aaPredicted RBP8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 CLDN15P56746 228 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 MTPNP58546 118 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 ADORA2A-AS1P86434 159 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 CRYZQ08257 329 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 LRRC74AQ0VAA2 488 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 TOMM20Q15388 145 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 ZNF141Q15928 474 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 ADRM1Q16186 407 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 TMEM44Q2T9K0 475 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 RUNDC3AQ59EK9 446 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 REP15Q6BDI9 236 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 C16orf62Q7Z3J2 963 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 PIGWQ7Z7B1 504 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 DHDDSQ86SQ9 333 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 DPP10Q8N608 796 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 TRIML2Q8N7C3 387 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 FAM57AQ8TBR7 257 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 POC1BQ8TC44 478 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 SLC38A5Q8WUX1 472 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 TIMP4Q99727 224 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 G6PC3Q9BUM1 346 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 CCDC106Q9BWC9 280 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 UGT2B28Q9BY64 529 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 TBL1XR1Q9BZK7 514 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 TMEM45AQ9NWC5 275 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 QPCTLQ9NXS2 382 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 TAS2R10Q9NYW0 307 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 MRTO4Q9UKD2 239 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 ICAM5Q9UMF0 924 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 NDUFAF1Q9Y375 327 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 WDR45Q9Y484 360 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 FAM215AQ9Y5M1 114 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 GMEB1Q9Y692 573 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 CENPEQ02224 2701 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 FBN2P35556 2912 aa8.56□□□□□ -1.04
NPLOC4-219ENST00000576713 HIVEP3Q5T1R4 2406 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 KIAA1549Q9HCM3 1950 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 POLEQ07864 2286 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 DOPEY1Q5JWR5 2465 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 A0A1W2PQD3 144 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 WIPF3A6NGB9 483 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 DUXAA6NLW8 204 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 EFNA2O43921 213 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 HCN1O60741 890 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 STX11O75558 287 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 GCM2O75603 506 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 WNT11O96014 354 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 LDLRP01130 860 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 BCHEP06276 602 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 ABOP16442 354 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 ATP6V1C1P21283 382 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 RPS4Y1P22090 263 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 PSMA4P25789 261 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 DPP4P27487 766 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 SRD5A2P31213 254 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 GZMMP51124 257 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 DSTNP60981 165 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 IRX1P78414 480 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 SKP2Q13309 424 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 GXYLT1Q4G148 440 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 GPAT3Q53EU6 434 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 RABL3Q5HYI8 236 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 VASNQ6EMK4 673 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 ARHGAP11AQ6P4F7 1023 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 SEM1Q6ZVN7 128 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 PTOV1Q86YD1 416 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 ZNF619Q8N2I2 560 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 ZNF614Q8N883 585 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 FAM71CQ8NEG0 241 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 OR4K17Q8NGC6 315 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 PHOSPHO1Q8TCT1 267 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 CNOT9Q92600 299 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 RELTQ969Z4 430 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 RCN3Q96D15 328 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 C1GALT1C1Q96EU7 318 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 WDYHV1Q96HA8 205 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 CCDC120Q96HB5 630 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 TMEM19Q96HH6 336 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 ANKRD27Q96NW4 1050 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 TRNT1Q96Q11 434 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 DMRTA2Q96SC8 542 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 LDAHQ9H6V9 325 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 B4GALT7Q9UBV7 327 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 LEF1Q9UJU2 399 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 VDAC3Q9Y277 283 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 DTNAQ9Y4J8 743 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 NINQ8N4C6 2090 aa8.55□□□□□ -1.04
NPLOC4-219ENST00000576713 ZNF407Q9C0G0 2248 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 FLNBO75369 2602 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 RP1L1Q8IWN7 2480 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 DOPEY2Q9Y3R5 2298 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 C15orf38-AP3S2A0A0A6YYH1 394 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 OR2M5A3KFT3 312 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 SERINC4A6NH21 518 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms