RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 TMEM38AQ9H6F2 299 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 PLCXD1Q9NUJ7 323 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 ASIC5Q9NY37 505 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 COPS7AQ9UBW8 275 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 AHCTF1Q8WYP5 2266 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 A8MVJ9 347 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 TNFRSF10AO00220 468 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 FOXE1O00358 373 aaPredicted RBP16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 DSCR3O14972 297 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 TMPRSS11DO60235 418 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 PRKXP51817 358 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 LIM2P55344 173 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 GPM6BQ13491 265 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 CALHM3Q86XJ0 350 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 NRSN1Q8IZ57 195 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 LGALS14Q8TCE9 139 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 ISG20Q96AZ6 181 aaKnown RBP16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 INSM2Q96T92 566 aaPredicted RBP16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 CDCA4Q9BXL8 241 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 SYT4Q9H2B2 425 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 SIDT1Q9NXL6 827 aaKnown RBP16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 CHST2Q9Y4C5 530 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 TRIP12Q14669 1992 aaPredicted RBP16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 H7C1C5 153 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 CASC3O15234 703 aaKnown RBP16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 NDUFB2O95178 105 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 IGLV3-27P01718 113 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 F13BP05160 661 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 HCKP08631 526 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 SOX9P48436 509 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 LCN6P62502 163 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 OR1Q1Q15612 314 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 ZNF584Q8IVC4 421 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 OR13C5Q8NGS8 318 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 OR2L2Q8NH16 312 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 AMDHD1Q96NU7 426 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 GABARAPL3Q9BY60 117 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 POTEKPQ9BYX7 375 aa16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 MBD1Q9UIS9 605 aaPredicted RBP16.71■□□□□ 0.27
ATPAF1-214ENST00000576409 UNCXA6NJT0 531 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 MAKP20794 623 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 OR10A3P58181 314 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 CDK3Q00526 305 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 CST9Q5W186 159 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 ZNF550Q7Z398 422 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 ABHD4Q8TB40 342 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 PDXPQ96GD0 296 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 UBQLN3Q9H347 655 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 PRTFDC1Q9NRG1 225 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 CDHR4A6H8M9 788 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 GPR89AB7ZAQ6 455 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 GPR89BP0CG08 455 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 CCL5P13501 91 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 LSSP48449 732 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 TRAM1Q15629 374 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 FAM76BQ5HYJ3 339 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 C8orf82Q6P1X6 216 aaPredicted RBP16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 OR5AK2Q8NH90 309 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 SEC22AQ96IW7 307 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 DDOQ99489 341 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 NT5DC2Q9H857 520 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 ERVK-19Q9WJR5 959 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 TEX13DA0A0J9YY54 714 aaPredicted RBP16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 RHPN2P1A8MT19 583 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 WRBO00258 174 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 SCGNO76038 276 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 S1PR1P21453 382 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 PBX2P40425 430 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 ACTA2P62736 377 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 ACTG2P63267 376 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 CDC20Q12834 499 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 HNRNPA1L2Q32P51 320 aaKnown RBP16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 SLC35F2Q8IXU6 374 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 ARL14Q8N4G2 192 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 ZFPM2Q8WW38 1151 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 MS4A4EQ96PG1 132 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 PSD2Q9BQI7 771 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 MS4A8Q9BY19 250 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 SLC17A9Q9BYT1 436 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 HINT3Q9NQE9 182 aaKnown RBP16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 PLEKHM1Q9Y4G2 1056 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 SGK494L7N484 410 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 KIAA0355O15063 1070 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 RNGTTO60942 597 aaKnown RBP16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 BMP1P13497 986 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 HOXD11P31277 338 aaPredicted RBP16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 METTL11BQ5VVY1 283 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 OTPQ5XKR4 325 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 CD163Q86VB7 1156 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 LINC01599Q8WXQ3 324 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 CHST8Q9H2A9 424 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 SEMA4GQ9NTN9 838 aa16.7■□□□□ 0.26
ATPAF1-214ENST00000576409 RDH16O75452 317 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 PRSS3P35030 304 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 FRKP42685 505 aaPredicted RBP16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 PDX1P52945 283 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 ULK3Q6PHR2 472 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 ZNF511Q8NB15 262 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 DUSP19Q8WTR2 217 aa16.69■□□□□ 0.26
ATPAF1-214ENST00000576409 OR2A14Q96R47 310 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms