RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 SLC35A3Q9Y2D2 325 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 NPFFR2Q9Y5X5 522 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 ZNF736B4DX44 427 aaPredicted RBP12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 CA12O43570 354 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 EGFP01133 1207 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 C6P13671 934 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 PGFP49763 221 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 RAB28P51157 221 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 CCR9P51686 369 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 C6orf132Q5T0Z8 1188 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 ACSM5Q6NUN0 579 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 ERN2Q76MJ5 926 aaKnown RBP12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 SLC51BQ86UW2 128 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 PRSS58Q8IYP2 241 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 OR7G2Q8NG99 324 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 QRSL1Q9H0R6 528 aaKnown RBP12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 ERVMER34-1Q9H9K5 563 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 A4GALTQ9NPC4 353 aa12.29□□□□□ -0.44
PCDHGB3-201ENST00000576222 TMEM189-UBE2V1I3L0A0 370 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 AGPAT2O15120 278 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 GABRB1P18505 474 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 CLDN12P56749 244 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 GLB1L2Q8IW92 636 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 SEC61A2Q9H9S3 476 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 HRH3Q9Y5N1 445 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 TMEM150CB9EJG8 249 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 GPRIN2O60269 458 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 SIX6O95475 246 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 SYPP08247 313 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 CR2P20023 1033 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 TRIM23P36406 574 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 PER3P56645 1201 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 FABP5Q01469 135 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 HYAL2Q12891 473 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 PDGFRLQ15198 375 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 ZNF322Q6U7Q0 402 aaPredicted RBP12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 PXT1Q8NFP0 134 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 FAM46BQ96A09 425 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 ZBTB8AQ96BR9 441 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 OR7D2Q96RA2 312 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 RPS10P5Q9NQ39 176 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 SLC23A1Q9UHI7 598 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 TRAV27A0A087WT01 109 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 WASH3PC4AMC7 463 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 TLX3O43711 291 aaPredicted RBP12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 TP53P04637 393 aaPredicted RBP12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 P2RY14Q15391 338 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 CLVS2Q5SYC1 327 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 RPL22L1Q6P5R6 122 aaKnown RBP12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 TEX261Q6UWH6 196 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 LRRC69Q6ZNQ3 347 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 TMEM25Q86YD3 366 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 ZNF740Q8NDX6 193 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 FOXJ1Q92949 421 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 SPNS1Q9H2V7 528 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 PNO1Q9NRX1 252 aaKnown RBP12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 U3KQ87 197 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 A8MVJ9 347 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 KHNYNO15037 678 aaKnown RBP12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 B4GALT3O60512 393 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 AHSA1O95433 338 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 ZNF35P13682 527 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 CERS1P27544 350 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 CHAF1BQ13112 559 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 SLC14A1Q13336 389 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 NNATQ16517 81 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 PXKQ7Z7A4 578 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 REM2Q8IYK8 340 aaPredicted RBP12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 ARL14Q8N4G2 192 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 ACOT4Q8N9L9 421 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 OR2L8Q8NGY9 312 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 COPS7AQ9UBW8 275 aa12.28□□□□□ -0.44
PCDHGB3-201ENST00000576222 ACOD1A6NK06 481 aa12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 NPIPA5E9PKD4 350 aa12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 SULT1C2O00338 296 aa12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 SOX1O00570 391 aaPredicted RBP12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 TXNL1O43396 289 aa12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 ATP1B1P05026 303 aa12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 CTXN1P60606 82 aa12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 ERVK-21P61565 698 aa12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 TPBGQ13641 420 aa12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 STK11Q15831 433 aa12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 AANATQ16613 207 aa12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 FAM71E1Q6IPT2 247 aa12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 PRSS45Q7RTY3 260 aa12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 UQCC2Q9BRT2 126 aa12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 G6PC3Q9BUM1 346 aa12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 CPEB1Q9BZB8 566 aaKnown RBP12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 NPIPA1Q9UND3 350 aa12.27□□□□□ -0.44
PCDHGB3-201ENST00000576222 NHSQ6T4R5 1651 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 C1SP09871 688 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 LIPCP11150 499 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 MAOAP21397 527 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 RIDAP52758 137 aaKnown RBP12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 IRF4Q15306 451 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 PDXPQ96GD0 296 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 DEFB118Q96PH6 123 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 TCEAL7Q9BRU2 100 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 NINQ8N4C6 2090 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms