RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 BHLHB9Q6PI77 547 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 UGT2A3Q6UWM9 527 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 IL17RELQ6ZVW7 336 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 LCA5Q86VQ0 697 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 SLC22A9Q8IVM8 553 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 TMEM151AQ8N4L1 468 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 COX18Q8N8Q8 333 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 ATP6V1C2Q8NEY4 427 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 NUP43Q8NFH3 380 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 OR52N5Q8NH56 324 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 SGMS2Q8NHU3 365 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 PHOSPHO1Q8TCT1 267 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 MUS81Q96NY9 551 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 BTBD2Q9BX70 525 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 TSPYL1Q9H0U9 437 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 COQ10BQ9H8M1 238 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 RRAGDQ9NQL2 400 aaPredicted RBP7.92□□□□□ -1.14
SMG6-218ENST00000575454 DUSP22Q9NRW4 184 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 SERINC1Q9NRX5 453 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 ASB6Q9NWX5 421 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 TAS2R16Q9NYV7 291 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 ING1Q9UK53 422 aaPredicted RBP7.92□□□□□ -1.14
SMG6-218ENST00000575454 FBXO9Q9UK97 447 aaPredicted RBP7.92□□□□□ -1.14
SMG6-218ENST00000575454 SLC25A15Q9Y619 301 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 ATP23Q9Y6H3 246 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.92□□□□□ -1.14
SMG6-218ENST00000575454 IGKV3D-15A0A087WSY6 115 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 IGHV3-15A0A0B4J1V0 119 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 C9JVG2 144 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 ETV2O00321 342 aaPredicted RBP7.91□□□□□ -1.14
SMG6-218ENST00000575454 GPR171O14626 319 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 SMAD9O15198 467 aaKnown RBP7.91□□□□□ -1.14
SMG6-218ENST00000575454 EFNA2O43921 213 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 RAD51DO75771 328 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 RSL1D1O76021 490 aaKnown RBP7.91□□□□□ -1.14
SMG6-218ENST00000575454 ZNF23P17027 643 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 PRKCAP17252 672 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 ATP5F1P24539 256 aaPredicted RBP7.91□□□□□ -1.14
SMG6-218ENST00000575454 CFPP27918 469 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 HTR6P50406 440 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 PRKAA2P54646 552 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 NAA20P61599 178 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 SNRPD2P62316 118 aaKnown RBP7.91□□□□□ -1.14
SMG6-218ENST00000575454 PHC1P78364 1004 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 POU6F2P78424 691 aaPredicted RBP7.91□□□□□ -1.14
SMG6-218ENST00000575454 TGFBR3Q03167 851 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 CBFBQ13951 182 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 TRADDQ15628 312 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 CD226Q15762 336 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 DUSP5Q16690 384 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 CR1LQ2VPA4 569 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 KLHL26Q53HC5 615 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 SLC25A53Q5H9E4 307 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 NOXRED1Q6NXP6 359 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 C3orf33Q6P1S2 294 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 ZDHHC24Q6UX98 284 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 LRIG3Q6UXM1 1119 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 ZNF551Q7Z340 670 aaPredicted RBP7.91□□□□□ -1.14
SMG6-218ENST00000575454 SZRD1Q7Z422 152 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 TRIM46Q7Z4K8 759 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 C17orf78Q8N4C9 275 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 SLC16A11Q8NCK7 471 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 TOR1AIP2Q8NFQ8 470 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 OR5W2Q8NH69 310 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 GPR119Q8TDV5 335 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 ZNF75CPQ92670 426 aaPredicted RBP7.91□□□□□ -1.14
SMG6-218ENST00000575454 HPS1Q92902 700 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 APH1AQ96BI3 265 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 ZNF775Q96BV0 537 aaPredicted RBP7.91□□□□□ -1.14
SMG6-218ENST00000575454 ZHX1-C8orf76Q96EF9 292 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 STACQ99469 402 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 PRR14Q9BWN1 585 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 FUT8Q9BYC5 575 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 ADAM19Q9H013 955 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 ACSS1Q9NUB1 689 aaPredicted RBP7.91□□□□□ -1.14
SMG6-218ENST00000575454 GIN1Q9NXP7 522 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 ZNF180Q9UJW8 692 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 ICAM5Q9UMF0 924 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 CARD8Q9Y2G2 431 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 NOSIPQ9Y314 301 aaKnown RBP7.91□□□□□ -1.14
SMG6-218ENST00000575454 POLR3HQ9Y535 204 aaPredicted RBP7.91□□□□□ -1.14
SMG6-218ENST00000575454 TIMM22Q9Y584 194 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 MED12LQ86YW9 2145 aa7.91□□□□□ -1.14
SMG6-218ENST00000575454 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 IGHV4-61A0A0C4DH41 118 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 A0A1W2PNR3 127 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 EIF4E2O60573 245 aaKnown RBP7.9□□□□□ -1.14
SMG6-218ENST00000575454 TBX19O60806 448 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 MRPL33O75394 65 aaKnown RBP7.9□□□□□ -1.14
SMG6-218ENST00000575454 CRCPO75575 148 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 ERCC1P07992 297 aaPredicted RBP7.9□□□□□ -1.14
SMG6-218ENST00000575454 KRT16P08779 473 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 SNRPAP09012 282 aaKnown RBP7.9□□□□□ -1.14
SMG6-218ENST00000575454 SBK3P0C264 359 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 ACP2P11117 423 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 PAX7P23759 505 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 FKBP2P26885 142 aaKnown RBP7.9□□□□□ -1.14
SMG6-218ENST00000575454 SPOCK1Q08629 439 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 CARTPTQ16568 116 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 SWI5Q1ZZU3 235 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms