RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 EXOC3L2Q2M3D2 409 aa23.3■■□□□ 1.32
NPLOC4-215ENST00000574095 TMEM176BQ3YBM2 270 aaPredicted RBP23.3■■□□□ 1.32
NPLOC4-215ENST00000574095 ATAD3BQ5T9A4 648 aa23.3■■□□□ 1.32
NPLOC4-215ENST00000574095 ZNF550Q7Z398 422 aa23.3■■□□□ 1.32
NPLOC4-215ENST00000574095 TOR1AIP2Q8NFQ8 470 aa23.3■■□□□ 1.32
NPLOC4-215ENST00000574095 OR6K3Q8NGY3 331 aa23.3■■□□□ 1.32
NPLOC4-215ENST00000574095 NEURL3Q96EH8 262 aa23.3■■□□□ 1.32
NPLOC4-215ENST00000574095 CCDC115Q96NT0 180 aa23.3■■□□□ 1.32
NPLOC4-215ENST00000574095 FOXC2Q99958 501 aa23.3■■□□□ 1.32
NPLOC4-215ENST00000574095 PLSCR4Q9NRQ2 329 aa23.3■■□□□ 1.32
NPLOC4-215ENST00000574095 C6orf203Q9P0P8 240 aaPredicted RBP23.3■■□□□ 1.32
NPLOC4-215ENST00000574095 BTNL2Q9UIR0 455 aa23.3■■□□□ 1.32
NPLOC4-215ENST00000574095 C16orf97H3BN30 126 aa23.29■■□□□ 1.32
NPLOC4-215ENST00000574095 AGR2O95994 175 aa23.29■■□□□ 1.32
NPLOC4-215ENST00000574095 FUT5Q11128 374 aa23.29■■□□□ 1.32
NPLOC4-215ENST00000574095 CBFBQ13951 182 aa23.29■■□□□ 1.32
NPLOC4-215ENST00000574095 QPRTQ15274 297 aa23.29■■□□□ 1.32
NPLOC4-215ENST00000574095 MAPK14Q16539 360 aa23.29■■□□□ 1.32
NPLOC4-215ENST00000574095 NXNQ6DKJ4 435 aa23.29■■□□□ 1.32
NPLOC4-215ENST00000574095 TYW3Q6IPR3 259 aaKnown RBP23.29■■□□□ 1.32
NPLOC4-215ENST00000574095 PAMR1Q6UXH9 720 aa23.29■■□□□ 1.32
NPLOC4-215ENST00000574095 ROPN1LQ96C74 230 aa23.29■■□□□ 1.32
NPLOC4-215ENST00000574095 MRGPRX4Q96LA9 322 aa23.29■■□□□ 1.32
NPLOC4-215ENST00000574095 MED18Q9BUE0 208 aa23.29■■□□□ 1.32
NPLOC4-215ENST00000574095 THUMPD3Q9BV44 507 aaKnown RBP23.29■■□□□ 1.32
NPLOC4-215ENST00000574095 SRXN1Q9BYN0 137 aa23.29■■□□□ 1.32
NPLOC4-215ENST00000574095 KLHL4Q9C0H6 718 aa23.29■■□□□ 1.32
NPLOC4-215ENST00000574095 LAT2Q9GZY6 243 aa23.29■■□□□ 1.32
NPLOC4-215ENST00000574095 NTN1O95631 604 aa23.28■■□□□ 1.32
NPLOC4-215ENST00000574095 CSTAP01040 98 aa23.28■■□□□ 1.32
NPLOC4-215ENST00000574095 SKP2Q13309 424 aa23.28■■□□□ 1.32
NPLOC4-215ENST00000574095 SLC25A53Q5H9E4 307 aa23.28■■□□□ 1.32
NPLOC4-215ENST00000574095 ANKRD34AQ69YU3 496 aa23.28■■□□□ 1.32
NPLOC4-215ENST00000574095 RAB3IL1Q8TBN0 382 aa23.28■■□□□ 1.32
NPLOC4-215ENST00000574095 OR52E6Q96RD3 313 aa23.28■■□□□ 1.32
NPLOC4-215ENST00000574095 PANX1Q96RD7 426 aa23.28■■□□□ 1.32
NPLOC4-215ENST00000574095 INPP5KQ9BT40 448 aa23.28■■□□□ 1.32
NPLOC4-215ENST00000574095 CXXC4Q9H2H0 198 aa23.28■■□□□ 1.32
NPLOC4-215ENST00000574095 GLRX2Q9NS18 164 aa23.28■■□□□ 1.32
NPLOC4-215ENST00000574095 WDR45Q9Y484 360 aa23.28■■□□□ 1.32
NPLOC4-215ENST00000574095 PRAMEF27A3QJZ7 478 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 CCDC154A6NI56 674 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 GJE1A6NN92 205 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 SLCO1B7G3V0H7 640 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 RAF1P04049 648 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 PGRP06401 933 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 UBTFL6P0CB48 400 aaPredicted RBP23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 CDKN2CP42773 168 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 KHKP50053 298 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 ZNF239Q16600 458 aaKnown RBP23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 SLC9B1Q4ZJI4 515 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 GTF2IRD2BQ6EKJ0 949 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 C22orf34Q6ZV56 151 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 HMGN2P46Q86SG4 172 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 GTF2IRD2Q86UP8 949 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 ZG16BQ96DA0 208 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 ZC3HAV1LQ96H79 300 aaKnown RBP23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 COQ10BQ9H8M1 238 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 TIGARQ9NQ88 270 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 ZNF226Q9NYT6 803 aa23.27■■□□□ 1.32
NPLOC4-215ENST00000574095 SIAH2O43255 324 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 KIAA0513O60268 411 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 GSNP06396 782 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 NID1P14543 1247 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 KEAP1Q14145 624 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 TIGD2Q4W5G0 525 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 GPAT3Q53EU6 434 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 FRRS1Q6ZNA5 592 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 ZNF621Q6ZSS3 439 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 EIF3MQ7L2H7 374 aaKnown RBP23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 RNF130Q86XS8 419 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 ZNF619Q8N2I2 560 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 ZFP90Q8TF47 636 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 ABHD3Q8WU67 409 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 CPNE4Q96A23 557 aaPredicted RBP23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 REXO5Q96IC2 774 aaKnown RBP23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 MARK4Q96L34 752 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 ZBTB18Q99592 522 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 SAP130Q9H0E3 1048 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 QRSL1Q9H0R6 528 aaKnown RBP23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 C12orf49Q9H741 205 aa23.26■■□□□ 1.31
NPLOC4-215ENST00000574095 ITPR3Q14573 2671 aa23.25■■□□□ 1.31
NPLOC4-215ENST00000574095 A0A1W2PNR3 127 aa23.25■■□□□ 1.31
NPLOC4-215ENST00000574095 DEFB108AA8MXU0 73 aa23.25■■□□□ 1.31
NPLOC4-215ENST00000574095 HMGN4O00479 90 aa23.25■■□□□ 1.31
NPLOC4-215ENST00000574095 ATE1O95260 518 aa23.25■■□□□ 1.31
NPLOC4-215ENST00000574095 GUSBP08236 651 aa23.25■■□□□ 1.31
NPLOC4-215ENST00000574095 AGTR1P30556 359 aa23.25■■□□□ 1.31
NPLOC4-215ENST00000574095 PGM1P36871 562 aa23.25■■□□□ 1.31
NPLOC4-215ENST00000574095 SELENBP1Q13228 472 aa23.25■■□□□ 1.31
NPLOC4-215ENST00000574095 MAVSQ7Z434 540 aa23.25■■□□□ 1.31
NPLOC4-215ENST00000574095 TRIML2Q8N7C3 387 aa23.25■■□□□ 1.31
NPLOC4-215ENST00000574095 RNF128Q8TEB7 428 aa23.25■■□□□ 1.31
NPLOC4-215ENST00000574095 MAELQ96JY0 434 aaKnown RBP23.25■■□□□ 1.31
NPLOC4-215ENST00000574095 POLE3Q9NRF9 147 aa23.25■■□□□ 1.31
NPLOC4-215ENST00000574095 ETV2O00321 342 aaPredicted RBP23.24■■□□□ 1.31
NPLOC4-215ENST00000574095 DNAJA2O60884 412 aa23.24■■□□□ 1.31
NPLOC4-215ENST00000574095 BCAS1O75363 584 aaPredicted RBP23.24■■□□□ 1.31
NPLOC4-215ENST00000574095 PABPC4LP0CB38 370 aaKnown RBP23.24■■□□□ 1.31
NPLOC4-215ENST00000574095 CRYGSP22914 178 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms