RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 RPTNQ6XPR3 784 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 TRPM8Q7Z2W7 1104 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 ARPINQ7Z6K5 226 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 GTPBP8Q8N3Z3 284 aaPredicted RBP9.98□□□□□ -0.81
CHD3-216ENST00000573936 POU5F2Q8N7G0 328 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 C11orf65Q8NCR3 313 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 BHLHE22Q8NFJ8 381 aaPredicted RBP9.98□□□□□ -0.81
CHD3-216ENST00000573936 NFKBIDQ8NI38 313 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 ZPLD1Q8TCW7 415 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 GPR119Q8TDV5 335 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 TMEM234Q8WY98 164 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 RCN3Q96D15 328 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 WDYHV1Q96HA8 205 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 ECSITQ9BQ95 431 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 IKZF5Q9H5V7 419 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 KAT8Q9H7Z6 458 aaKnown RBP9.98□□□□□ -0.81
CHD3-216ENST00000573936 VDAC3Q9Y277 283 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 GPC6Q9Y625 555 aaPredicted RBP9.98□□□□□ -0.81
CHD3-216ENST00000573936 NINQ8N4C6 2090 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 POLQO75417 2590 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 CENPVL1A0A0U1RR11 272 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 OR2M5A3KFT3 312 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 PRORSD1PA6NEY8 169 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 CCT8L1PA6NM43 557 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 AIM2O14862 343 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 DNAJA2O60884 412 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 SERPINB7O75635 380 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 LINGO3P0C6S8 592 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 PABPC4LP0CB38 370 aaKnown RBP9.97□□□□□ -0.81
CHD3-216ENST00000573936 UQCRBP14927 111 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 LHX2P50458 406 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 CCR4P51679 360 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 B3GALT5-AS1P59052 145 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 SKP2Q13309 424 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 TMEM44Q2T9K0 475 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 ZNF311Q5JNZ3 666 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 RPS26P11Q5JNZ5 115 aaPredicted RBP9.97□□□□□ -0.81
CHD3-216ENST00000573936 C1orf185Q5T7R7 199 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 INTS11Q5TA45 600 aaKnown RBP9.97□□□□□ -0.81
CHD3-216ENST00000573936 ERICH5Q6P6B1 374 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 C6orf89Q6UWU4 347 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 HACD2Q6Y1H2 254 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 B3GNT6Q6ZMB0 384 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 CHMP1BQ7LBR1 199 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 ZNF550Q7Z398 422 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 NET1Q7Z628 596 aaPredicted RBP9.97□□□□□ -0.81
CHD3-216ENST00000573936 GRAMD2AQ8IUY3 354 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 ULK2Q8IYT8 1036 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 MEIOBQ8N635 442 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 FAM71CQ8NEG0 241 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 OR10A6Q8NH74 314 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 ZNF563Q8TA94 476 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 ST8SIA1Q92185 356 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 MAL2Q969L2 176 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 MRGPRX4Q96LA9 322 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 QRSL1Q9H0R6 528 aaKnown RBP9.97□□□□□ -0.81
CHD3-216ENST00000573936 EVA1AQ9H8M9 152 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 CALHM2Q9HA72 323 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 ARL8BQ9NVJ2 186 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 TNFRSF10DQ9UBN6 386 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 ZNF443Q9Y2A4 671 aaPredicted RBP9.97□□□□□ -0.81
CHD3-216ENST00000573936 ZNF337Q9Y3M9 751 aa9.97□□□□□ -0.81
CHD3-216ENST00000573936 GJE1A6NN92 205 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 H0Y3Z8 333 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 FXYD1O00168 92 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 FAAHO00519 579 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 OIP5O43482 229 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 EPPINO95925 133 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 ZNF708P17019 499 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 AGAP20933 346 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 TCEA1P23193 301 aaKnown RBP9.96□□□□□ -0.82
CHD3-216ENST00000573936 ME2P23368 584 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 ELK4P28324 431 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 PRKAR1BP31321 381 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 STARP49675 285 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 RNF144AP50876 292 aaPredicted RBP9.96□□□□□ -0.82
CHD3-216ENST00000573936 RPS3AP61247 264 aaKnown RBP9.96□□□□□ -0.82
CHD3-216ENST00000573936 RAC1P63000 192 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 SRYQ05066 204 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 SELPLGQ14242 412 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 KRT72Q14CN4 511 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 QPRTQ15274 297 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 ADRM1Q16186 407 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 NDUFAF6Q330K2 333 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 SLC25A53Q5H9E4 307 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 PDSS1Q5T2R2 415 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 MRPL2Q5T653 305 aaKnown RBP9.96□□□□□ -0.82
CHD3-216ENST00000573936 RNF220Q5VTB9 566 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 XKRXQ6PP77 449 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 VRK2Q86Y07 508 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 PTOV1Q86YD1 416 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 MCEMP1Q8IX19 187 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 RND1Q92730 232 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 SLC35B4Q969S0 331 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 CCDC120Q96HB5 630 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 RNF145Q96MT1 663 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 DMRTA2Q96SC8 542 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 SLC39A3Q9BRY0 314 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 SERINC1Q9NRX5 453 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms