RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TMEM41AQ96HV5 264 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 PRRC1Q96M27 445 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 SIGLEC12Q96PQ1 595 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 MCHR1Q99705 422 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 SMAD5Q99717 465 aaKnown RBP6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 PIP5K1AQ99755 562 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 FNDC11Q9BVV2 318 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 CHID1Q9BWS9 393 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 ANGPTL4Q9BY76 406 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 TRIM2Q9C040 744 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 POLR2J2Q9GZM3 115 aaKnown RBP6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 LAT2Q9GZY6 243 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 POLR2J3Q9H1A7 115 aaKnown RBP6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 REEP1Q9H902 201 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 TMEM27Q9HBJ8 222 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 CCM2LQ9NUG4 571 aaPredicted RBP6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 RLIMQ9NVW2 624 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 KIF17Q9P2E2 1029 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 KCNE5Q9UJ90 142 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 CNOT11Q9UKZ1 510 aaKnown RBP6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 ENPP4Q9Y6X5 453 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 FER1L5A0AVI2 2057 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 KIF26BQ2KJY2 2108 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 PCSK5Q92824 1860 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 ELOA3CA0A087WX78 387 aaPredicted RBP6□□□□□ -1.45
CTDNEP1-204ENST00000570484 A0A087WZY1 265 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 TRAPPC13A5PLN9 417 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 ANKUB1A6NFN9 424 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 ELOA3DA6NLF2 546 aaPredicted RBP6□□□□□ -1.45
CTDNEP1-204ENST00000570484 OIP5O43482 229 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 PEX1O43933 1283 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 CDC40O60508 579 aaKnown RBP eCLIP6□□□□□ -1.45
CTDNEP1-204ENST00000570484 TIPRLO75663 272 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 NEURL1O76050 574 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 OR5F1O95221 314 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 GADD45GO95257 159 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 H1F0P07305 194 aaKnown RBP6□□□□□ -1.45
CTDNEP1-204ENST00000570484 SP1P08047 785 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 GKN3PP0CG01 181 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 GP1BBP13224 206 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZNF24P17028 368 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 RHCEP18577 417 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 CNR1P21554 472 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 RRM2P31350 389 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 YAP1P46937 504 aaKnown RBP6□□□□□ -1.45
CTDNEP1-204ENST00000570484 MEOX1P50221 254 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 TNFSF10P50591 281 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 CDH12P55289 794 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 SESN3P58005 492 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 VLDLRP98155 873 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 HOXC5Q00444 222 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 ST3GAL3Q11203 375 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 EPS8Q12929 822 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZNF169Q14929 603 aaPredicted RBP6□□□□□ -1.45
CTDNEP1-204ENST00000570484 INAQ16352 499 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 ELOA3BQ3SY89 546 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 ALG10BQ5I7T1 473 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 ENTPD8Q5MY95 495 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 FNDC7Q5VTL7 733 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 RAET1LQ5VY80 246 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 AP1ARQ63HQ0 302 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 WBP2NLQ6ICG8 309 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 OR5M10Q6IEU7 315 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 OR2T5Q6IEZ7 315 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 POMZP3Q6PJE2 187 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 ASB18Q6ZVZ8 466 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 GALNTL5Q7Z4T8 443 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 SLC22A16Q86VW1 577 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 OFCC1Q8IZS5 231 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 MDS2Q8NDY4 140 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 ELOA3Q8NG57 546 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 OR2M7Q8NG81 312 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 OR6T1Q8NGN1 323 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 OR2T29Q8NH02 315 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 ADAMTS16Q8TE57 1224 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 SNRNP27Q8WVK2 155 aaKnown RBP6□□□□□ -1.45
CTDNEP1-204ENST00000570484 DNAJA4Q8WW22 397 aaPredicted RBP6□□□□□ -1.45
CTDNEP1-204ENST00000570484 HAS2Q92819 552 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZNF300Q96RE9 604 aaPredicted RBP6□□□□□ -1.45
CTDNEP1-204ENST00000570484 BDH2Q9BUT1 245 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 ADNPQ9H2P0 1102 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 VCXQ9H320 206 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 DCLRE1BQ9H816 532 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 S100A14Q9HCY8 104 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZFP64Q9NPA5 681 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 IL1RAPQ9NPH3 570 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 CTPS2Q9NRF8 586 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 ARMC1Q9NVT9 282 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 TAS2R10Q9NYW0 307 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 MED11Q9P086 117 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 DNAJB9Q9UBS3 223 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 TUBD1Q9UJT1 453 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 TMCC3Q9ULS5 477 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 VDAC3Q9Y277 283 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 TP53TG5Q9Y2B4 290 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 SAMHD1Q9Y3Z3 626 aaKnown RBP6□□□□□ -1.45
CTDNEP1-204ENST00000570484 TESMINQ9Y4I5 508 aa6□□□□□ -1.45
CTDNEP1-204ENST00000570484 SPIN1Q9Y657 262 aaPredicted RBP6□□□□□ -1.45
CTDNEP1-204ENST00000570484 IGLV3-32A0A0A0MS00 114 aa5.99□□□□□ -1.45
CTDNEP1-204ENST00000570484 A0A0G2JMM0 328 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms