RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 ETV5P41161 510 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CETN2P41208 172 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 PGGT1BP53609 377 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 MLLT10P55197 1068 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CLDN17P56750 224 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 GSCP56915 257 aaPredicted RBP2.86□□□□□ -1.95
CNOT1-221ENST00000569924 ISL1P61371 349 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 EEF1A1P68104 462 aaKnown RBP2.86□□□□□ -1.95
CNOT1-221ENST00000569924 SRSF6Q13247 344 aaKnown RBP2.86□□□□□ -1.95
CNOT1-221ENST00000569924 MFAP5Q13361 173 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 PEX6Q13608 980 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 KEAP1Q14145 624 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 KIR2DS5Q14953 304 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 OPCMLQ14982 345 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 C16orf72Q14CZ0 275 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 PDK3Q15120 406 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CYTH1Q15438 398 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 SPHARQ15513 63 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 TATDN3Q17R31 274 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 PARP15Q460N3 678 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CCDC14Q49A88 953 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 GPAT3Q53EU6 434 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CT45A2Q5DJT8 189 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 FNBP1LQ5T0N5 605 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 FAM72AQ5TYM5 149 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 EEF1A1P5Q5VTE0 462 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 KCTD16Q68DU8 428 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 SPECC1LQ69YQ0 1117 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 FAM72DQ6L9T8 149 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 RWDD4Q6NW29 188 aaKnown RBP2.86□□□□□ -1.95
CNOT1-221ENST00000569924 NIPAL3Q6P499 406 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 RAD9BQ6WBX8 426 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 LEKR1Q6ZMV7 388 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 ZNF66Q6ZN08 573 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 LCNL1Q6ZST4 164 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 Q6ZTK2 550 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CYP4V2Q6ZWL3 525 aaPredicted RBP2.86□□□□□ -1.95
CNOT1-221ENST00000569924 RD3Q7Z3Z2 195 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CPEB2Q7Z5Q1 589 aaKnown RBP2.86□□□□□ -1.95
CNOT1-221ENST00000569924 LUZP1Q86V48 1076 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 PIM3Q86V86 326 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 FAM72BQ86X60 149 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 ZNF677Q86XU0 584 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.86□□□□□ -1.95
CNOT1-221ENST00000569924 RCOR2Q8IZ40 523 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 UMODL1-AS1Q8N2C9 162 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 BHLHE23Q8NDY6 225 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CCDC112Q8NEF3 446 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 OR4D9Q8NGE8 314 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 OR4L1Q8NH43 312 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 MPLKIPQ8TAP9 179 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 AGR3Q8TD06 166 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 GIMAP1Q8WWP7 306 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 RXFP2Q8WXD0 754 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 OR1E3Q8WZA6 343 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 HIST1H2ACQ93077 130 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 MCHR2Q969V1 340 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 NTAN1Q96AB6 310 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 TMEM45BQ96B21 275 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 PINX1Q96BK5 328 aaKnown RBP2.86□□□□□ -1.95
CNOT1-221ENST00000569924 ECHDC3Q96DC8 303 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 MRPL53Q96EL3 112 aaKnown RBP2.86□□□□□ -1.95
CNOT1-221ENST00000569924 PDXPQ96GD0 296 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 SLC41A3Q96GZ6 507 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 SLC45A3Q96JT2 553 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 MARK4Q96L34 752 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 C3orf30Q96M34 536 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CATSPER2Q96P56 530 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 BTBD9Q96Q07 612 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 NEURL2Q9BR09 285 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 WRAP53Q9BUR4 548 aaKnown RBP2.86□□□□□ -1.95
CNOT1-221ENST00000569924 TRAF4Q9BUZ4 470 aaPredicted RBP2.86□□□□□ -1.95
CNOT1-221ENST00000569924 ALG12Q9BV10 488 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 DDA1Q9BW61 102 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 GSDMCQ9BYG8 508 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 SPRTNQ9H040 489 aaPredicted RBP2.86□□□□□ -1.95
CNOT1-221ENST00000569924 PDFQ9HBH1 243 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CRLF2Q9HC73 371 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 FGF22Q9HCT0 170 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 RDH8Q9NYR8 311 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 LHX3Q9UBR4 397 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 BCAP29Q9UHQ4 241 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 BAIAP2L1Q9UHR4 511 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CLEC4AQ9UMR7 237 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 NSG2Q9Y328 171 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 ATG4BQ9Y4P1 393 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 OR1A2Q9Y585 309 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 RNF215Q9Y6U7 377 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CENPEQ02224 2701 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 RELNP78509 3460 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 ANKRD36A6QL64 1941 aa2.85□□□□□ -1.95
CNOT1-221ENST00000569924 ITPR2Q14571 2701 aa2.85□□□□□ -1.95
CNOT1-221ENST00000569924 ICE1Q9Y2F5 2266 aa2.85□□□□□ -1.95
CNOT1-221ENST00000569924 SPENQ96T58 3664 aaKnown RBP2.85□□□□□ -1.95
CNOT1-221ENST00000569924 IGHV5-10-1A0A0J9YXX1 117 aa2.85□□□□□ -1.95
CNOT1-221ENST00000569924 A0A0U1RQS6 177 aa2.85□□□□□ -1.95
CNOT1-221ENST00000569924 ATP6AP2A0A1C7CYW4 349 aa2.85□□□□□ -1.95
CNOT1-221ENST00000569924 A0A1W2PQ67 120 aa2.85□□□□□ -1.95
CNOT1-221ENST00000569924 ANKRD61A6NGH8 418 aa2.85□□□□□ -1.95
CNOT1-221ENST00000569924 DBX1A6NMT0 343 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms