RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 EXOSC6Q5RKV6 272 aaKnown RBP11.72□□□□□ -0.53
SPG7-221ENST00000569720 STEAP2Q8NFT2 490 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 OR56A1Q8NGH5 318 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 POC1BQ8TC44 478 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 ADAMTS15Q8TE58 950 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 CDS1Q92903 461 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 CPNE4Q96A23 557 aaPredicted RBP11.72□□□□□ -0.53
SPG7-221ENST00000569720 OTUB1Q96FW1 271 aaPredicted RBP11.72□□□□□ -0.53
SPG7-221ENST00000569720 PLPPR2Q96GM1 343 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 NPAS1Q99742 590 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 CCDC28BQ9BUN5 200 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 HDHD5Q9BXW7 423 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 ACTRT3Q9BYD9 372 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 PIGUQ9H490 435 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 SLCO1B3Q9NPD5 702 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 ATAD3AQ9NVI7 634 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 TMEM45AQ9NWC5 275 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 FAF1Q9UNN5 650 aaPredicted RBP11.72□□□□□ -0.53
SPG7-221ENST00000569720 GPC6Q9Y625 555 aaPredicted RBP11.72□□□□□ -0.53
SPG7-221ENST00000569720 USH1CQ9Y6N9 552 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 GTPBP1O00178 669 aaKnown RBP11.71□□□□□ -0.53
SPG7-221ENST00000569720 PIP5K1BO14986 540 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 LYPLA1O75608 230 aaPredicted RBP11.71□□□□□ -0.53
SPG7-221ENST00000569720 FAM107AO95990 144 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 CCT3P49368 545 aaKnown RBP11.71□□□□□ -0.53
SPG7-221ENST00000569720 P2RX1P51575 399 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 SUMO3P55854 103 aaPredicted RBP11.71□□□□□ -0.53
SPG7-221ENST00000569720 ZNF117Q03924 483 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 FOXF1Q12946 379 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 TP53BP2Q13625 1128 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 CD226Q15762 336 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 ZNF239Q16600 458 aaKnown RBP11.71□□□□□ -0.53
SPG7-221ENST00000569720 SPDYE7PQ495Y7 208 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 ATP6AP1LQ52LC2 224 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 XKR7Q5GH72 579 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 OGFOD2Q6N063 350 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 CDC73Q6P1J9 531 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 EPGNQ6UW88 154 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 SPATA19Q7Z5L4 167 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 CIARTQ8N365 385 aaPredicted RBP11.71□□□□□ -0.53
SPG7-221ENST00000569720 ZNF611Q8N823 705 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 OR7A2PQ8NGA2 310 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 ROBO4Q8WZ75 1007 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 OR5P2Q8WZ92 322 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 MOAP1Q96BY2 351 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 MAELQ96JY0 434 aaKnown RBP11.71□□□□□ -0.53
SPG7-221ENST00000569720 PRPF18Q99633 342 aaKnown RBP11.71□□□□□ -0.53
SPG7-221ENST00000569720 NGBQ9NPG2 151 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 SIRT3Q9NTG7 399 aaPredicted RBP11.71□□□□□ -0.53
SPG7-221ENST00000569720 PNPOQ9NVS9 261 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 TRIM33Q9UPN9 1127 aa11.71□□□□□ -0.53
SPG7-221ENST00000569720 HIVEP2P31629 2446 aa11.71□□□□□ -0.54
SPG7-221ENST00000569720 FN1P02751 2386 aaKnown RBP11.71□□□□□ -0.54
SPG7-221ENST00000569720 ZANQ9Y493 2812 aa11.71□□□□□ -0.54
SPG7-221ENST00000569720 JMJD1CQ15652 2540 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 USF3Q68DE3 2245 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 FREM1Q5H8C1 2179 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 TRIM64A6NGJ6 449 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 TRIM64BA6NI03 449 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 TMEM233B4DJY2 109 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 ZNF195O14628 629 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 HS3ST1O14792 307 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 PEX11AO75192 247 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 PRKD3O94806 890 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 CNOT4O95628 575 aaKnown RBP11.7□□□□□ -0.54
SPG7-221ENST00000569720 LAMP1P11279 417 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 PAX1P15863 534 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 IL32P24001 234 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 ATP12AP54707 1039 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 PPP2R2BQ00005 443 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 DCST2Q5T1A1 773 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 ALKBH2Q6NS38 261 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 FCRLAQ7L513 359 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 ZNF614Q8N883 585 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 FBXO27Q8NI29 283 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 SFXN5Q8TD22 340 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 RNF128Q8TEB7 428 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 GP6Q9HCN6 339 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 FGFR1OP2Q9NVK5 253 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 ASIC5Q9NY37 505 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 KLHL13Q9P2N7 655 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 CARD8Q9Y2G2 431 aa11.7□□□□□ -0.54
SPG7-221ENST00000569720 PRR14LQ5THK1 2151 aa11.69□□□□□ -0.54
SPG7-221ENST00000569720 CFLARO15519 480 aa11.69□□□□□ -0.54
SPG7-221ENST00000569720 PLAUP00749 431 aa11.69□□□□□ -0.54
SPG7-221ENST00000569720 YES1P07947 543 aa11.69□□□□□ -0.54
SPG7-221ENST00000569720 LBPP18428 481 aa11.69□□□□□ -0.54
SPG7-221ENST00000569720 PCSK6P29122 969 aa11.69□□□□□ -0.54
SPG7-221ENST00000569720 SLC7A1P30825 629 aa11.69□□□□□ -0.54
SPG7-221ENST00000569720 ATP5J2P56134 94 aa11.69□□□□□ -0.54
SPG7-221ENST00000569720 EMX2Q04743 252 aa11.69□□□□□ -0.54
SPG7-221ENST00000569720 PTGR1Q14914 329 aa11.69□□□□□ -0.54
SPG7-221ENST00000569720 TMEM176BQ3YBM2 270 aaPredicted RBP11.69□□□□□ -0.54
SPG7-221ENST00000569720 KLHL26Q53HC5 615 aa11.69□□□□□ -0.54
SPG7-221ENST00000569720 GKAP1Q5VSY0 366 aaPredicted RBP11.69□□□□□ -0.54
SPG7-221ENST00000569720 BHLHB9Q6PI77 547 aa11.69□□□□□ -0.54
SPG7-221ENST00000569720 CBLN3Q6UW01 205 aa11.69□□□□□ -0.54
SPG7-221ENST00000569720 TUSC5Q8IXB3 177 aa11.69□□□□□ -0.54
SPG7-221ENST00000569720 SLC43A2Q8N370 569 aa11.69□□□□□ -0.54
SPG7-221ENST00000569720 ANKS4BQ8N8V4 417 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms