RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 FAM49BQ9NUQ9 324 aa2.88□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZNF701Q9NV72 531 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P6-201ENST00000569046 INTS9Q9NV88 658 aaKnown RBP2.88□□□□□ -1.95
HMGB1P6-201ENST00000569046 ELOVL2Q9NXB9 296 aa2.88□□□□□ -1.95
HMGB1P6-201ENST00000569046 FBXL12Q9NXK8 326 aa2.88□□□□□ -1.95
HMGB1P6-201ENST00000569046 GDAP2Q9NXN4 497 aa2.88□□□□□ -1.95
HMGB1P6-201ENST00000569046 RBAKQ9NYW8 714 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P6-201ENST00000569046 CDH9Q9ULB4 789 aa2.88□□□□□ -1.95
HMGB1P6-201ENST00000569046 CHMP2BQ9UQN3 213 aa2.88□□□□□ -1.95
HMGB1P6-201ENST00000569046 CAB39Q9Y376 341 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P6-201ENST00000569046 SPACA6W5XKT8 324 aa2.88□□□□□ -1.95
HMGB1P6-201ENST00000569046 NAV2Q8IVL1 2488 aa2.88□□□□□ -1.95
HMGB1P6-201ENST00000569046 CHD5Q8TDI0 1954 aa2.88□□□□□ -1.95
HMGB1P6-201ENST00000569046 ACACAQ13085 2346 aa2.88□□□□□ -1.95
HMGB1P6-201ENST00000569046 TEX15Q9BXT5 2789 aa2.88□□□□□ -1.95
HMGB1P6-201ENST00000569046 CABIN1Q9Y6J0 2220 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 LOC101059948A0A1B0GTJ6 334 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 GOLGA6L7A0A1B0GV03 622 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 MEIOCA2RUB1 952 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 KRTAP16-1A8MUX0 517 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 E5RGE8 158 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 E9PAM4 449 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 K7ENP7 123 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 LAD1O00515 517 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 CHUKO15111 745 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 NME2P1O60361 137 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 TBX19O60806 448 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZFAND5O76080 213 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 TNFSF15O95150 251 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 TBX6O95947 436 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 IL1BP01584 269 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 PIGRP01833 764 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 TNNC2P02585 160 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 FAM157CP0CG43 387 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 RALAP11233 206 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 F3P13726 295 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 TNNI1P19237 187 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 EFNA1P20827 205 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 CA4P22748 312 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 WARSP23381 471 aaKnown RBP2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 GJB2P29033 226 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 OTX2P32243 289 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 CD70P32970 193 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 ATP5C1P36542 298 aaKnown RBP2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 CASP4P49662 377 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 VAMP7P51809 220 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 MYL6P60660 151 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 PPP1R7Q15435 360 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 STX1AQ16623 288 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 KYAT1Q16773 422 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 C10orf120Q5SQS8 335 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 NCR3LG1Q68D85 454 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 UGT3A1Q6NUS8 523 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 TTC27Q6P3X3 843 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 FAM159AQ6UWV7 190 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 TAS2R42Q7RTR8 314 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZNF720Q7Z2F6 126 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 BNIPLQ7Z465 357 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 TMEM139Q8IV31 216 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 MMAAQ8IVH4 418 aaKnown RBP2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 LGI2Q8N0V4 545 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 KLHDC1Q8N7A1 406 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 TRPV3Q8NET8 790 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 OR6C4Q8NGE1 309 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 OR8J1Q8NGP2 316 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 WFDC5Q8TCV5 224 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 SLC2A14Q8TDB8 520 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 HCAR2Q8TDS4 363 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 TSACCQ96A04 125 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 CCDC127Q96BQ5 260 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 OTUB2Q96DC9 234 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 GIMAP5Q96F15 307 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 WBP1Q96G27 269 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 GMPPAQ96IJ6 420 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 ANKRD36BP1Q96IX9 119 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 RBM41Q96IZ5 413 aaKnown RBP2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 PIWIL1Q96J94 861 aaKnown RBP2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 SERAC1Q96JX3 654 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 C4orf36Q96KX1 117 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZNF578Q96N58 590 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZBTB18Q99592 522 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 GPA33Q99795 319 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 ALKBH7Q9BT30 221 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 FICDQ9BVA6 458 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 MRPL13Q9BYD1 178 aaKnown RBP2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 RAB34Q9BZG1 259 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 SMYD3Q9H7B4 428 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 CALHM2Q9HA72 323 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 PARVGQ9HBI0 331 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 CRLF2Q9HC73 371 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 ASCL3Q9NQ33 180 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 HOMER3Q9NSC5 361 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 RDH8Q9NYR8 311 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 HMGXB4Q9UGU5 601 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 LSM7Q9UK45 103 aaKnown RBP2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 FOXJ3Q9UPW0 622 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 NSG2Q9Y328 171 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 NBPF19A0A087WUL8 3843 aa2.87□□□□□ -1.95
HMGB1P6-201ENST00000569046 DOPEY2Q9Y3R5 2298 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms