RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 HDHD5Q9BXW7 423 aa13.76□□□□□ -0.21
NME3-211ENST00000568561 TRIM2Q9C040 744 aa13.76□□□□□ -0.21
NME3-211ENST00000568561 NGBQ9NPG2 151 aa13.76□□□□□ -0.21
NME3-211ENST00000568561 YAE1D1Q9NRH1 226 aa13.76□□□□□ -0.21
NME3-211ENST00000568561 GJE1A6NN92 205 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 GTPBP1O00178 669 aaKnown RBP13.75□□□□□ -0.21
NME3-211ENST00000568561 PIP5K1BO14986 540 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 H6PDO95479 791 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 HSPA4LO95757 839 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 CHEK2O96017 543 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 TP53P04637 393 aaPredicted RBP13.75□□□□□ -0.21
NME3-211ENST00000568561 SLC7A1P30825 629 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 ASMTP46597 345 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 C21orf58P58505 322 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 ITGADQ13349 1161 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 PTGR1Q14914 329 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 ETFDHQ16134 617 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 SPDYE7PQ495Y7 208 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 HMBOX1Q6NT76 420 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 OLIG3Q7RTU3 272 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 MTERF4Q7Z6M4 381 aaKnown RBP13.75□□□□□ -0.21
NME3-211ENST00000568561 ZNF527Q8NB42 609 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 OR5D16Q8NGK9 328 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 OR5AK3PQ8NH89 298 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 OR2W6PQ8NHA6 318 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 PIWIL2Q8TC59 973 aaKnown RBP13.75□□□□□ -0.21
NME3-211ENST00000568561 ADAMTS15Q8TE58 950 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 TWIST2Q8WVJ9 160 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 MTERF3Q96E29 417 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 PSD2Q9BQI7 771 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 TRAF4Q9BUZ4 470 aaPredicted RBP13.75□□□□□ -0.21
NME3-211ENST00000568561 QRSL1Q9H0R6 528 aaKnown RBP13.75□□□□□ -0.21
NME3-211ENST00000568561 GPATCH2Q9NW75 528 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 NPAP1Q9NZP6 1156 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 ATP6V1HQ9UI12 483 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 TMED5Q9Y3A6 229 aa13.75□□□□□ -0.21
NME3-211ENST00000568561 GPC6Q9Y625 555 aaPredicted RBP13.75□□□□□ -0.21
NME3-211ENST00000568561 H3BNH8 94 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 SMAD9O15198 467 aaKnown RBP13.74□□□□□ -0.21
NME3-211ENST00000568561 C6orf47O95873 294 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 CD8AP01732 235 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 KRT4P19013 534 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 OR3A2P47893 321 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 CCT3P49368 545 aaKnown RBP13.74□□□□□ -0.21
NME3-211ENST00000568561 CDH11P55287 796 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 SUMO3P55854 103 aaPredicted RBP13.74□□□□□ -0.21
NME3-211ENST00000568561 RPS26P62854 115 aaKnown RBP13.74□□□□□ -0.21
NME3-211ENST00000568561 SELENBP1Q13228 472 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 P2RY6Q15077 328 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 QPRTQ15274 297 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 RNF165Q6ZSG1 346 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 Q6ZT83 130 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 R3HCC1LQ7Z5L2 792 aaKnown RBP13.74□□□□□ -0.21
NME3-211ENST00000568561 TDRPQ86YL5 185 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 KRTCAP2Q8N6L1 136 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 UBLCP1Q8WVY7 318 aaPredicted RBP13.74□□□□□ -0.21
NME3-211ENST00000568561 HS6ST2Q96MM7 605 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 ACTRT3Q9BYD9 372 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 GP6Q9HCN6 339 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 KLHL9Q9P2J3 617 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 FAF1Q9UNN5 650 aaPredicted RBP13.74□□□□□ -0.21
NME3-211ENST00000568561 ACTL7BQ9Y614 415 aa13.74□□□□□ -0.21
NME3-211ENST00000568561 CENPVL1A0A0U1RR11 272 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 RNF212BA8MTL3 300 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 SHISA9B4DS77 424 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 NPIPB9F8W1W9 429 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 KIF2AO00139 706 aaPredicted RBP13.73□□□□□ -0.21
NME3-211ENST00000568561 CD5LO43866 347 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 PEX11AO75192 247 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 CYP7B1O75881 506 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 SOAT1P35610 550 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 ATP12AP54707 1039 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 RASGEF1BQ0VAM2 473 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 MLC1Q15049 377 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 PPA1Q15181 289 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 UGT3A2Q3SY77 523 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 TIGD2Q4W5G0 525 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 PDZK1Q5T2W1 519 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 DNM1P46Q6ZS02 220 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 OR56A1Q8NGH5 318 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 HTRA1Q92743 480 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 DNAJA3Q96EY1 480 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 MRGPRX4Q96LA9 322 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 OR5B2Q96R09 309 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 OR7D2Q96RA2 312 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 MECRQ9BV79 373 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 HOXD1Q9GZZ0 328 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 ALG2Q9H553 416 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 BCO1Q9HAY6 547 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 CISD1Q9NZ45 108 aaKnown RBP13.73□□□□□ -0.21
NME3-211ENST00000568561 DTNAQ9Y4J8 743 aa13.73□□□□□ -0.21
NME3-211ENST00000568561 YLPM1P49750 1951 aaKnown RBP13.72□□□□□ -0.21
NME3-211ENST00000568561 ESPNB1AK53 854 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 TMEM114B3SHH9 223 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 ABCD4O14678 606 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 ZNF264O43296 627 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 SSX4O60224 188 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 GPRIN2O60269 458 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 TRIM13O60858 407 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 SKAP2O75563 359 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms